RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 LIFRP42702 1097 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 CDK8P49336 464 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 FOSBP53539 338 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 GABPAQ06546 454 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 TCP10Q12799 353 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 RCSD1Q6JBY9 416 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 C16orf86Q6ZW13 317 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 CERS3Q8IU89 383 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 ESR2Q92731 530 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 ZSCAN10Q96SZ4 725 aaPredicted RBP6.78□□□□□ -1.32
TTC39C-201ENST00000304621 DDTLA6NHG4 134 aaPredicted RBP6.78□□□□□ -1.32
TTC39C-201ENST00000304621 EGFRP00533 1210 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 ADD1P35611 737 aaKnown RBP6.78□□□□□ -1.32
TTC39C-201ENST00000304621 NUCB2P80303 420 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 WTAPQ15007 396 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 SHROOM1Q2M3G4 852 aaPredicted RBP6.78□□□□□ -1.32
TTC39C-201ENST00000304621 NFXL1Q6ZNB6 911 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 MICU3Q86XE3 530 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 HOMEZQ8IX15 550 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 DNAJC18Q9H819 358 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 MTMR6Q9Y217 621 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 ZNF541Q9H0D2 1346 aa6.78□□□□□ -1.32
TTC39C-201ENST00000304621 CLRN2A0PK11 232 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 C19orf67A6NJJ6 358 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 FAM196BA6NMK8 535 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 STX6O43752 255 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 BAG4O95429 457 aaKnown RBP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 YBX3P16989 372 aaKnown RBP eCLIP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 MCM4P33991 863 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 TFAP4Q01664 338 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 NTRK3Q16288 839 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 CIAPIN1Q6FI81 312 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 CDC37L1Q7L3B6 337 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 ZNF654Q8IZM8 581 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 ZBED3Q96IU2 234 aaPredicted RBP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 UBAC1Q9BSL1 405 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 SYT17Q9BSW7 474 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 GJB4Q9NTQ9 266 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 CNTNAP1P78357 1384 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 NID2Q14112 1375 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 CCDC69A6NI79 296 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 GOLGA8AA7E2F4 631 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 FZD9O00144 591 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 ZBTB43O43298 467 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 ZSCAN22P10073 491 aaPredicted RBP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 PCP11498 1178 aaKnown RBP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 SHMT1P34896 483 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 METAP2P50579 478 aaKnown RBP eCLIP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 PDE4BQ07343 736 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 FOXD4L6Q3SYB3 417 aaPredicted RBP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 FOXD4L3Q6VB84 417 aaPredicted RBP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 CLEC17AQ6ZS10 378 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 RASGRP2Q7LDG7 609 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 CLEC10AQ8IUN9 316 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 CDAN1Q8IWY9 1227 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 CMTR1Q8N1G2 835 aaKnown RBP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 AIFM3Q96NN9 605 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 LLPHQ9BRT6 129 aaKnown RBP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 IDI2Q9BXS1 227 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 SCAF8Q9UPN6 1271 aaKnown RBP6.77□□□□□ -1.33
TTC39C-201ENST00000304621 MYO3BQ8WXR4 1341 aa6.77□□□□□ -1.33
TTC39C-201ENST00000304621 TSPY2A6NKD2 308 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 HAX1O00165 279 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 SLC3A2P08195 630 aaKnown RBP6.76□□□□□ -1.33
TTC39C-201ENST00000304621 AKR1B1P15121 316 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 LARP1BQ659C4 914 aaKnown RBP6.76□□□□□ -1.33
TTC39C-201ENST00000304621 OTUD7BQ6GQQ9 843 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 AGBL3Q8NEM8 1001 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 JDP2Q8WYK2 163 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 PHKBQ93100 1093 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 MTA3Q9BTC8 594 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 MKNK2Q9HBH9 465 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 ZNF70Q9UC06 446 aaPredicted RBP6.76□□□□□ -1.33
TTC39C-201ENST00000304621 SLC12A7Q9Y666 1083 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 ASTN2O75129 1339 aaPredicted RBP6.76□□□□□ -1.33
TTC39C-201ENST00000304621 VPS37CA5D8V6 355 aaPredicted RBP6.76□□□□□ -1.33
TTC39C-201ENST00000304621 TCP10L2B9ZVM9 353 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 F13A1P00488 732 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 GMPSP49915 693 aaPredicted RBP6.76□□□□□ -1.33
TTC39C-201ENST00000304621 GUCY1B3Q02153 619 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 RRP1BQ14684 758 aaKnown RBP6.76□□□□□ -1.33
TTC39C-201ENST00000304621 NBPF9Q3BBW0 867 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 IFIT1BQ5T764 474 aaKnown RBP6.76□□□□□ -1.33
TTC39C-201ENST00000304621 FAM173BQ6P4H8 233 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 NBPF11Q86T75 865 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 FERMT3Q86UX7 667 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 AMOTL1Q8IY63 956 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 NUP133Q8WUM0 1156 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 CHMP4CQ96CF2 233 aa6.76□□□□□ -1.33
TTC39C-201ENST00000304621 GREB1LQ9C091 1923 aaPredicted RBP6.76□□□□□ -1.33
TTC39C-201ENST00000304621 WDR33Q9C0J8 1336 aaKnown RBP6.75□□□□□ -1.33
TTC39C-201ENST00000304621 SBF1O95248 1867 aa6.75□□□□□ -1.33
TTC39C-201ENST00000304621 GOLGB1Q14789 3259 aaKnown RBP6.75□□□□□ -1.33
TTC39C-201ENST00000304621 ERICH2A1L162 156 aa6.75□□□□□ -1.33
TTC39C-201ENST00000304621 PLEKHA8P1O95397 391 aa6.75□□□□□ -1.33
TTC39C-201ENST00000304621 TSPY3P0CV98 308 aa6.75□□□□□ -1.33
TTC39C-201ENST00000304621 TSPY8P0CW00 308 aa6.75□□□□□ -1.33
TTC39C-201ENST00000304621 GUCY1A2P33402 732 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms