RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 IFT20Q8IY31 132 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 DYMQ7RTS9 669 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 CCDC87Q9NVE4 849 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.49■■□□□ 1.35
LETM1-201ENST00000302787 KDM5DQ9BY66 1539 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 FAM135BQ49AJ0 1406 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 CABP7Q86V35 215 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 SEC62Q99442 399 aaKnown RBP23.49■■□□□ 1.35
LETM1-201ENST00000302787 PSMD1Q99460 953 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 LZTS2Q9BRK4 669 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 CDCA7Q9BWT1 371 aaPredicted RBP23.49■■□□□ 1.35
LETM1-201ENST00000302787 SH2D4AQ9H788 454 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.49■■□□□ 1.35
LETM1-201ENST00000302787 MAGEA1P43355 309 aa23.49■■□□□ 1.35
LETM1-201ENST00000302787 RBM26Q5T8P6 1007 aaKnown RBP23.48■■□□□ 1.35
LETM1-201ENST00000302787 GGA1Q9UJY5 639 aa23.48■■□□□ 1.35
LETM1-201ENST00000302787 ARID4AP29374 1257 aaPredicted RBP23.48■■□□□ 1.35
LETM1-201ENST00000302787 PPARAQ07869 468 aa23.48■■□□□ 1.35
LETM1-201ENST00000302787 NCAPH2Q6IBW4 605 aa23.48■■□□□ 1.35
LETM1-201ENST00000302787 CERS3Q8IU89 383 aa23.48■■□□□ 1.35
LETM1-201ENST00000302787 GABPB1Q06547 395 aaPredicted RBP23.48■■□□□ 1.35
LETM1-201ENST00000302787 WDR44Q5JSH3 913 aa23.48■■□□□ 1.35
LETM1-201ENST00000302787 GOLGA6CA6NDK9 693 aa23.48■■□□□ 1.35
LETM1-201ENST00000302787 GOLGA6DP0CG33 693 aa23.48■■□□□ 1.35
LETM1-201ENST00000302787 GOLGA6AQ9NYA3 693 aa23.48■■□□□ 1.35
LETM1-201ENST00000302787 ZNF500O60304 480 aaPredicted RBP23.47■■□□□ 1.35
LETM1-201ENST00000302787 BIRC3Q13489 604 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 ADKP55263 362 aaKnown RBP23.47■■□□□ 1.35
LETM1-201ENST00000302787 SETDB1Q15047 1291 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 CALCRLQ16602 461 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 HERC4Q5GLZ8 1057 aaPredicted RBP23.47■■□□□ 1.35
LETM1-201ENST00000302787 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.47■■□□□ 1.35
LETM1-201ENST00000302787 RASSF4Q9H2L5 321 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 WWC3Q9ULE0 1092 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 TCIRG1Q13488 830 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 HAUS7Q99871 368 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 UTP11Q9Y3A2 253 aaKnown RBP23.47■■□□□ 1.35
LETM1-201ENST00000302787 FNBP1Q96RU3 617 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 KAT6BQ8WYB5 2073 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 MYOM2P54296 1465 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 KDM5CP41229 1560 aa23.47■■□□□ 1.35
LETM1-201ENST00000302787 ZNF654Q8IZM8 581 aa23.46■■□□□ 1.35
LETM1-201ENST00000302787 UBAP1LF5GYI3 381 aa23.46■■□□□ 1.35
LETM1-201ENST00000302787 ACTN4O43707 911 aaKnown RBP23.46■■□□□ 1.35
LETM1-201ENST00000302787 ZNF354CQ86Y25 554 aa23.46■■□□□ 1.35
LETM1-201ENST00000302787 BCL2L12Q9HB09 334 aa23.46■■□□□ 1.35
LETM1-201ENST00000302787 NKIRAS1Q9NYS0 192 aa23.46■■□□□ 1.35
LETM1-201ENST00000302787 HSPD1P10809 573 aaKnown RBP23.46■■□□□ 1.35
LETM1-201ENST00000302787 B4GALNT4Q76KP1 1039 aa23.46■■□□□ 1.35
LETM1-201ENST00000302787 NOSTRINQ8IVI9 506 aa23.46■■□□□ 1.35
LETM1-201ENST00000302787 LSG1Q9H089 658 aaKnown RBP23.46■■□□□ 1.35
LETM1-201ENST00000302787 FAM47AQ5JRC9 791 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 STK24Q9Y6E0 443 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 ARHGEF5Q12774 1597 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 ATP5DP30049 168 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 SMTNP53814 917 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 GPIHBP1Q8IV16 184 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 TBC1D7Q9P0N9 293 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 CCNL1Q9UK58 526 aaPredicted RBP23.45■■□□□ 1.34
LETM1-201ENST00000302787 TFAP4Q01664 338 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 NCBP1Q09161 790 aaKnown RBP23.45■■□□□ 1.34
LETM1-201ENST00000302787 GPR161Q8N6U8 529 aaKnown RBP23.45■■□□□ 1.34
LETM1-201ENST00000302787 CCDC169A6NNP5 214 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 NDUFAB1O14561 156 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 VIMP08670 466 aaKnown RBP23.45■■□□□ 1.34
LETM1-201ENST00000302787 UBL4BQ8N7F7 174 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 STAP2Q9UGK3 403 aa23.45■■□□□ 1.34
LETM1-201ENST00000302787 SYNMO15061 1565 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 PABPN1LA6NDY0 278 aaKnown RBP23.44■■□□□ 1.34
LETM1-201ENST00000302787 ERCC3P19447 782 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 CTSWP56202 376 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 ZMYM6O95789 1325 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 GAS2L3Q86XJ1 694 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 CCDC51Q96ER9 411 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 GOLGA6BA6NDN3 693 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 PAXIP1Q6ZW49 1069 aaPredicted RBP23.44■■□□□ 1.34
LETM1-201ENST00000302787 ARHGEF10LQ9HCE6 1279 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 ADCY9O60503 1353 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 MAPKAPK5Q8IW41 473 aa23.44■■□□□ 1.34
LETM1-201ENST00000302787 ARHGEF35A5YM69 484 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 CHAMP1Q96JM3 812 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 PSMB7Q99436 277 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 CEP104O60308 925 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 OAS2P29728 719 aaKnown RBP23.43■■□□□ 1.34
LETM1-201ENST00000302787 CCDC84Q86UT8 332 aaPredicted RBP23.43■■□□□ 1.34
LETM1-201ENST00000302787 CSRNP2Q9H175 543 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 DNM3Q9UQ16 869 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 NELFCDQ8IXH7 590 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 MAK16Q9BXY0 300 aaKnown RBP23.43■■□□□ 1.34
LETM1-201ENST00000302787 TXNDC16Q9P2K2 825 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 MAST3O60307 1309 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 CMA1P23946 247 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 HSPA2P54652 639 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 KLHL30Q0D2K2 578 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 ERVV-2B6SEH9 535 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 LRMPQ12912 555 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 SFMBT2Q5VUG0 894 aa23.43■■□□□ 1.34
LETM1-201ENST00000302787 IFNL3Q8IZI9 196 aa23.42■■□□□ 1.34
LETM1-201ENST00000302787 JDP2Q8WYK2 163 aa23.42■■□□□ 1.34
LETM1-201ENST00000302787 TSKSQ9UJT2 592 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms