RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 JADE2Q9NQC1 790 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 ZSWIM5Q9P217 1185 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 CTNND2Q9UQB3 1225 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 KRT18P05783 430 aaKnown RBP15.95■□□□□ 0.14
SDC2-201ENST00000302190 TRIM21P19474 475 aaKnown RBP15.95■□□□□ 0.14
SDC2-201ENST00000302190 PPP2R3AQ06190 1150 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 FUCA2Q9BTY2 467 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 CNNM2Q9H8M5 875 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 SENP2Q9HC62 589 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 PIH1D3Q9NQM4 214 aaKnown RBP15.95■□□□□ 0.14
SDC2-201ENST00000302190 CCDC152Q4G0S7 254 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 CCDC181Q5TID7 509 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 ATG9AQ7Z3C6 839 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 KLHL34Q8N239 644 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 TAB2Q9NYJ8 693 aa15.95■□□□□ 0.14
SDC2-201ENST00000302190 LOC102724428A0A0B4J2F2 783 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 SIK1P57059 783 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 TBC1D10CQ8IV04 446 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 SECISBP2LQ93073 1101 aaKnown RBP15.94■□□□□ 0.14
SDC2-201ENST00000302190 PSMB7Q99436 277 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 MCM9Q9NXL9 1143 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 STAT6P42226 847 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 SLC39A14Q15043 492 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 IQCB1Q15051 598 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 PUM3Q15397 648 aaKnown RBP15.94■□□□□ 0.14
SDC2-201ENST00000302190 NOSTRINQ8IVI9 506 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 SAMSN1Q9NSI8 373 aaKnown RBP15.94■□□□□ 0.14
SDC2-201ENST00000302190 SLIT2O94813 1529 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 H7C1W4 665 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 UBXN1Q04323 297 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 AKNAD1Q5T1N1 836 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 FMR1NBQ8N0W7 255 aaPredicted RBP15.94■□□□□ 0.14
SDC2-201ENST00000302190 ZNF444Q8N0Y2 327 aaPredicted RBP15.94■□□□□ 0.14
SDC2-201ENST00000302190 TMEM87BQ96K49 555 aa15.94■□□□□ 0.14
SDC2-201ENST00000302190 C5P01031 1676 aa15.93■□□□□ 0.14
SDC2-201ENST00000302190 CYB5R4Q7L1T6 521 aa15.93■□□□□ 0.14
SDC2-201ENST00000302190 DPF2Q92785 391 aa15.93■□□□□ 0.14
SDC2-201ENST00000302190 ACBD3Q9H3P7 528 aa15.93■□□□□ 0.14
SDC2-201ENST00000302190 PLEKHA4Q9H4M7 779 aa15.93■□□□□ 0.14
SDC2-201ENST00000302190 AATFQ9NY61 560 aaKnown RBP eCLIP15.93■□□□□ 0.14
SDC2-201ENST00000302190 AKR1B15C9JRZ8 316 aaPredicted RBP15.93■□□□□ 0.14
SDC2-201ENST00000302190 CUTAO60888 179 aa15.93■□□□□ 0.14
SDC2-201ENST00000302190 RILPL1Q5EBL4 403 aa15.93■□□□□ 0.14
SDC2-201ENST00000302190 KAT14Q9H8E8 782 aa15.93■□□□□ 0.14
SDC2-201ENST00000302190 WDHD1O75717 1129 aaPredicted RBP15.92■□□□□ 0.14
SDC2-201ENST00000302190 CDC27P30260 824 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 CTSWP56202 376 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 KRBA2Q6ZNG9 492 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 ANKRD18AQ8IVF6 992 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 SLF1Q9BQI6 1058 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 VPS18Q9P253 973 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 SPATA31A6Q5VVP1 1343 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 SH3TC1Q8TE82 1336 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
SDC2-201ENST00000302190 FOXO4P98177 505 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 TDRD12Q587J7 1177 aaKnown RBP15.92■□□□□ 0.14
SDC2-201ENST00000302190 DHX40Q8IX18 779 aaKnown RBP15.92■□□□□ 0.14
SDC2-201ENST00000302190 ZNF654Q8IZM8 581 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 NEK11Q8NG66 645 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 KDM3BQ7LBC6 1761 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 PDE8BO95263 885 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 DNAJC21Q5F1R6 531 aaKnown RBP15.92■□□□□ 0.14
SDC2-201ENST00000302190 CDC5LQ99459 802 aaKnown RBP15.92■□□□□ 0.14
SDC2-201ENST00000302190 PCDHB6Q9Y5E3 794 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 DISP2A7MBM2 1401 aa15.92■□□□□ 0.14
SDC2-201ENST00000302190 FDPSP14324 419 aaKnown RBP15.91■□□□□ 0.14
SDC2-201ENST00000302190 IBSPP21815 317 aaPredicted RBP15.91■□□□□ 0.14
SDC2-201ENST00000302190 KRT2P35908 639 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 ARID5AQ03989 594 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 LRP10Q7Z4F1 713 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 ZBTB38Q8NAP3 1195 aaPredicted RBP15.91■□□□□ 0.14
SDC2-201ENST00000302190 IMPACTQ9P2X3 320 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 PPP2R2CQ9Y2T4 447 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 F8W031 263 aaPredicted RBP15.91■□□□□ 0.14
SDC2-201ENST00000302190 PDE8AO60658 829 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 GYS2P54840 703 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 KMT5BQ4FZB7 885 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 KANK3Q6NY19 840 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 AMIGO3Q86WK7 504 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 LPIN2Q92539 896 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 CRACR2AQ9BSW2 395 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 TSPYL1Q9H0U9 437 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 POLR3EQ9NVU0 708 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 USP42Q9H9J4 1324 aaKnown RBP15.91■□□□□ 0.14
SDC2-201ENST00000302190 PATL2C9JE40 543 aaKnown RBP15.91■□□□□ 0.14
SDC2-201ENST00000302190 DEXIO95424 95 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 SPECC1LQ69YQ0 1117 aa15.91■□□□□ 0.14
SDC2-201ENST00000302190 PARP4Q9UKK3 1724 aaKnown RBP15.91■□□□□ 0.14
SDC2-201ENST00000302190 USP17L12C9JPN9 530 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 USP17L21D6R901 530 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 ARHGAP6O43182 974 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 MYO1BO43795 1136 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 TEX2Q8IWB9 1127 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 SMARCC2Q8TAQ2 1214 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 EPSTI1Q96J88 318 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 TRPC5Q9UL62 973 aaPredicted RBP15.9■□□□□ 0.14
SDC2-201ENST00000302190 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 A0A1W2PQ27 194 aa15.9■□□□□ 0.14
SDC2-201ENST00000302190 A0A1W2PQ64 194 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms