RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PSME4Q14997 1843 aa18.32■□□□□ 0.52
HERPUD1-201ENST00000300302 PPFIA3O75145 1194 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 DDAH1O94760 285 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 TSPY3P0CV98 308 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 TSPY8P0CW00 308 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 NCLP19338 710 aaKnown RBP18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 IARSP41252 1262 aaKnown RBP18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 NIM1KQ8IY84 436 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 C8orf76Q96K31 380 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 FAM217BQ9NTX9 383 aaPredicted RBP18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 BRCA1P38398 1863 aaKnown RBP18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 IFNAR1P17181 557 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 CDK8P49336 464 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 NTRK3Q16288 839 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 DGKHQ86XP1 1220 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 TMEM87AQ8NBN3 555 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 FHDC1Q9C0D6 1143 aaPredicted RBP18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 TCP11L1Q9NUJ3 509 aa18.31■□□□□ 0.52
HERPUD1-201ENST00000300302 ADAMTSL1Q8N6G6 1762 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 STK36Q9NRP7 1315 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 ECM29Q5VYK3 1845 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 KRT85P78386 507 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 DNM1Q05193 864 aaKnown RBP18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 SSRP1Q08945 709 aaKnown RBP18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 GSE1Q14687 1217 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 RSBN1LQ6PCB5 846 aaPredicted RBP18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 TRIM22Q8IYM9 498 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 WASF1Q92558 559 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 TAOK3Q9H2K8 898 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 RBM28Q9NW13 759 aaKnown RBP18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 ZNRF3Q9ULT6 936 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
HERPUD1-201ENST00000300302 RASA1P20936 1047 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 DEKP35659 375 aaKnown RBP18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 FOSBP53539 338 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 DDX4Q9NQI0 724 aaKnown RBP18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 NMT2O60551 498 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 FMNL1O95466 1100 aaPredicted RBP18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 MBD3O95983 291 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 HLA-DOAP06340 250 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 VIL1P09327 827 aaKnown RBP18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 RESTQ13127 1097 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 USP48Q86UV5 1035 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 SLC44A5Q8NCS7 719 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 FBXO18Q8NFZ0 1043 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 PHKBQ93100 1093 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 HDAC9Q9UKV0 1011 aa18.29■□□□□ 0.52
HERPUD1-201ENST00000300302 RAD17O75943 681 aa18.28■□□□□ 0.52
HERPUD1-201ENST00000300302 ANKS1AQ92625 1134 aa18.28■□□□□ 0.52
HERPUD1-201ENST00000300302 ALG1Q9BT22 464 aa18.28■□□□□ 0.52
HERPUD1-201ENST00000300302 SLC26A6Q9BXS9 759 aa18.28■□□□□ 0.52
HERPUD1-201ENST00000300302 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
HERPUD1-201ENST00000300302 PSMD14O00487 310 aa18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 TROAPQ12815 778 aa18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 OGFOD1Q8N543 542 aa18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 CTCFLQ8NI51 663 aaPredicted RBP18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 IDI2Q9BXS1 227 aa18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 DHX36Q9H2U1 1008 aaKnown RBP18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 GDPD2Q9HCC8 539 aa18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 IL17RBQ9NRM6 502 aa18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 SWAP70Q9UH65 585 aa18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
HERPUD1-201ENST00000300302 TCHHQ07283 1943 aa18.27■□□□□ 0.51
HERPUD1-201ENST00000300302 FIBPO43427 364 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 TRIM29Q14134 588 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 FER1L6Q2WGJ9 1857 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 CFAP100Q494V2 611 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 RCSD1Q6JBY9 416 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 NEDD1Q8NHV4 660 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 JDP2Q8WYK2 163 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 SCAND2PQ9GZW5 306 aaPredicted RBP18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 GUCY1B3Q02153 619 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 CRACR2BQ8N4Y2 399 aaPredicted RBP18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 GZF1Q9H116 711 aaPredicted RBP18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 CFAP45Q9UL16 551 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 COL4A5P29400 1685 aa18.26■□□□□ 0.51
HERPUD1-201ENST00000300302 NFKBIEO00221 500 aa18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 DEXIO95424 95 aa18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 KIF5BP33176 963 aa18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 AKAP17AQ02040 695 aaKnown RBP18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 GABPAQ06546 454 aa18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 NFIAQ12857 509 aa18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 AGBL3Q8NEM8 1001 aa18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 MAP3K14Q99558 947 aa18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 EHD4Q9H223 541 aa18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
HERPUD1-201ENST00000300302 ATL3Q6DD88 541 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 NBPF11Q86T75 865 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 PNMA1Q8ND90 353 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 GMLQ99445 158 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 RNF26Q9BY78 433 aaPredicted RBP18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 PCDHAC2Q9Y5I4 1007 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 UBE2HP62256 183 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 RASSF7Q02833 373 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 FAM173BQ6P4H8 233 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 GPT2Q8TD30 523 aa18.24■□□□□ 0.51
HERPUD1-201ENST00000300302 SYT17Q9BSW7 474 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms