RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 PRAM1Q96QH2 718 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 LUZP4Q9P127 313 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 PGAP2Q9UHJ9 254 aa10.4□□□□□ -0.75
MMP3-201ENST00000299855 EDC4Q6P2E9 1401 aaKnown RBP10.39□□□□□ -0.75
MMP3-201ENST00000299855 KIF3CO14782 793 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 SKILP12757 684 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 PDCP20941 246 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 DNM1Q05193 864 aaKnown RBP10.39□□□□□ -0.75
MMP3-201ENST00000299855 MORC3Q14149 939 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 PARP10Q53GL7 1025 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 BRDTQ58F21 947 aaPredicted RBP10.39□□□□□ -0.75
MMP3-201ENST00000299855 KSR2Q6VAB6 950 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 RUFY3Q7L099 469 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 NELL1Q92832 810 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 KIF1BPQ96EK5 621 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 ZNF594Q96JF6 807 aaPredicted RBP10.39□□□□□ -0.75
MMP3-201ENST00000299855 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 SCAND2PQ9GZW5 306 aaPredicted RBP10.39□□□□□ -0.75
MMP3-201ENST00000299855 RMI1Q9H9A7 625 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 NGRNQ9NPE2 291 aaKnown RBP10.39□□□□□ -0.75
MMP3-201ENST00000299855 HOXC10Q9NYD6 342 aa10.39□□□□□ -0.75
MMP3-201ENST00000299855 NOVA2Q9UNW9 492 aaKnown RBP10.39□□□□□ -0.75
MMP3-201ENST00000299855 C19orf81C9J6K1 198 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 SETSIPP0DME0 302 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 KCNJ4P48050 445 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 IRX5P78411 483 aaPredicted RBP10.38□□□□□ -0.75
MMP3-201ENST00000299855 PTK7Q13308 1070 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 ESCO1Q5FWF5 840 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 WDR45BQ5MNZ6 344 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 ZNF396Q96N95 335 aaPredicted RBP10.38□□□□□ -0.75
MMP3-201ENST00000299855 SPAG5Q96R06 1193 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 CBX8Q9HC52 389 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 FAM83GA6ND36 823 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
MMP3-201ENST00000299855 RASA1P20936 1047 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 GJB2P29033 226 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 PPM1FP49593 454 aaPredicted RBP10.38□□□□□ -0.75
MMP3-201ENST00000299855 SFSWAPQ12872 951 aaKnown RBP10.38□□□□□ -0.75
MMP3-201ENST00000299855 PTPN14Q15678 1187 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 KRT24Q2M2I5 525 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 KMT5BQ4FZB7 885 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 CTR9Q6PD62 1173 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 EP400NLQ6ZTU2 488 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 LRRC8AQ8IWT6 810 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 ERCC4Q92889 916 aaPredicted RBP10.38□□□□□ -0.75
MMP3-201ENST00000299855 FAM212AQ96EL1 285 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 LSG1Q9H089 658 aaKnown RBP10.38□□□□□ -0.75
MMP3-201ENST00000299855 HYPKQ9NX55 129 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 EXOC6BQ9Y2D4 811 aa10.38□□□□□ -0.75
MMP3-201ENST00000299855 AFF2P51816 1311 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 SOS1Q07889 1333 aaPredicted RBP10.37□□□□□ -0.75
MMP3-201ENST00000299855 NPHP3Q7Z494 1330 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 DLC1Q96QB1 1528 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 ZNF76P36508 570 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 EPHB1P54762 984 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 SH3BGRP55822 239 aaPredicted RBP10.37□□□□□ -0.75
MMP3-201ENST00000299855 SNX16P57768 344 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 LRRC41Q15345 812 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 DUSP9Q99956 384 aaKnown RBP10.37□□□□□ -0.75
MMP3-201ENST00000299855 TNMDQ9H2S6 317 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 GPCPD1Q9NPB8 672 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 SH3GLB2Q9NR46 395 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 EMILIN1Q9Y6C2 1016 aa10.37□□□□□ -0.75
MMP3-201ENST00000299855 FAM170AA1A519 330 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 NCAM1P13591 858 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 VAC14Q08AM6 782 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 SERINC3Q13530 473 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 C14orf80Q86SX3 495 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 LUZP1Q86V48 1076 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 RASSF3Q86WH2 238 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 MICALL1Q8N3F8 863 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 CACTINQ8WUQ7 758 aaKnown RBP10.36□□□□□ -0.75
MMP3-201ENST00000299855 LZTS2Q9BRK4 669 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 ZSWIM6Q9HCJ5 1215 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.36□□□□□ -0.75
MMP3-201ENST00000299855 CLIP2Q9UDT6 1046 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 TTC21AQ8NDW8 1320 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 hCG_1984214I3L0E3 225 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 ALDH1L1O75891 902 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 BAIAP3O94812 1187 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 SLU7O95391 586 aaKnown RBP10.36□□□□□ -0.75
MMP3-201ENST00000299855 RXRBP28702 533 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 KIF5BP33176 963 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 CYP2C19P33261 490 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 LRMPQ12912 555 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 RASA3Q14644 834 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 ANO6Q4KMQ2 910 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 FAM83BQ5T0W9 1011 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 CFAP161Q6P656 301 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 TTC6Q86TZ1 520 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 UNC5CLQ8IV45 518 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 SPICE1Q8N0Z3 855 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 CNTROBQ8N137 903 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 RUFY2Q8WXA3 655 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 N4BP2L2Q92802 583 aaPredicted RBP10.36□□□□□ -0.75
MMP3-201ENST00000299855 CLSTN2Q9H4D0 955 aa10.36□□□□□ -0.75
MMP3-201ENST00000299855 N4BP2Q86UW6 1770 aaPredicted RBP10.36□□□□□ -0.75
MMP3-201ENST00000299855 FMN2Q9NZ56 1722 aa10.35□□□□□ -0.75
MMP3-201ENST00000299855 ATP8B1O43520 1251 aa10.35□□□□□ -0.75
MMP3-201ENST00000299855 FGRP09769 529 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms