RNA–Protein interactions for RNA: ENST00000299687.9

ZNF407-201, Transcript of zinc finger protein 407, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF407, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407-201ENST00000299687 LMCD1Q9NZU5 365 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 RARSP54136 660 aaKnown RBP13.54□□□□□ -0.24
ZNF407-201ENST00000299687 SYT10Q6XYQ8 523 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 NSD2O96028 1365 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 RAP1GDS1P52306 607 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 PABPC4Q13310 644 aaKnown RBP eCLIP13.54□□□□□ -0.24
ZNF407-201ENST00000299687 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 KRT12Q99456 494 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
ZNF407-201ENST00000299687 DACT1Q9NYF0 836 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 TPCN1Q9ULQ1 816 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 NUB1Q9Y5A7 615 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 GON4LQ3T8J9 2241 aa13.54□□□□□ -0.24
ZNF407-201ENST00000299687 PPP1R12AO14974 1030 aaPredicted RBP13.54□□□□□ -0.24
ZNF407-201ENST00000299687 SH3BGRP55822 239 aaPredicted RBP13.54□□□□□ -0.24
ZNF407-201ENST00000299687 SAP30BPQ9UHR5 308 aaKnown RBP13.54□□□□□ -0.24
ZNF407-201ENST00000299687 BAG2O95816 211 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 USP48Q86UV5 1035 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 CTNND2Q9UQB3 1225 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 ARHGAP25P42331 645 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 TBC1D2Q9BYX2 928 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 CHPF2Q9P2E5 772 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 TROVE2P10155 538 aaKnown RBP eCLIP13.53□□□□□ -0.24
ZNF407-201ENST00000299687 OTUD7BQ6GQQ9 843 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 NIM1KQ8IY84 436 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 JARID2Q92833 1246 aaPredicted RBP13.53□□□□□ -0.24
ZNF407-201ENST00000299687 AS3MTQ9HBK9 375 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 LARGE2Q8N3Y3 721 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 MGARPQ8TDB4 240 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 MIS12Q9H081 205 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 SUFUQ9UMX1 484 aa13.53□□□□□ -0.24
ZNF407-201ENST00000299687 CCDC124Q96CT7 223 aaKnown RBP13.52□□□□□ -0.24
ZNF407-201ENST00000299687 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.24
ZNF407-201ENST00000299687 KRT10P13645 584 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 IL2RBP14784 551 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 CD19P15391 556 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 LMNB1P20700 586 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 PHBP35232 272 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 CASP2P42575 452 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 TTC22Q5TAA0 569 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 PRPF38AQ8NAV1 312 aaKnown RBP13.52□□□□□ -0.24
ZNF407-201ENST00000299687 P3H4Q92791 437 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 TTC1Q99614 292 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 OLA1Q9NTK5 396 aaKnown RBP13.52□□□□□ -0.24
ZNF407-201ENST00000299687 DNM3Q9UQ16 869 aa13.52□□□□□ -0.24
ZNF407-201ENST00000299687 VWA3AA6NCI4 1184 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 GPR162Q16538 588 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 CDC37L1Q7L3B6 337 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 CCDC105Q8IYK2 499 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 FAF1Q9UNN5 650 aaPredicted RBP13.52□□□□□ -0.25
ZNF407-201ENST00000299687 TBC1D8BQ0IIM8 1120 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 MAEAQ7L5Y9 396 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 ABI1Q8IZP0 508 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
ZNF407-201ENST00000299687 GNPATO15228 680 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 ATICP31939 592 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 CD109Q6YHK3 1445 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 UFL1O94874 794 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 GNL1P36915 607 aaPredicted RBP13.52□□□□□ -0.25
ZNF407-201ENST00000299687 TYRO3Q06418 890 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 SF3A3Q12874 501 aaKnown RBP eCLIP13.52□□□□□ -0.25
ZNF407-201ENST00000299687 TSHZ3Q63HK5 1081 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 CABS1Q96KC9 395 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 CSRNP1Q96S65 589 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 NUP58Q9BVL2 599 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 SCHIP1Q9P0W5 487 aaPredicted RBP13.52□□□□□ -0.25
ZNF407-201ENST00000299687 GGA1Q9UJY5 639 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 ITM2BQ9Y287 266 aa13.52□□□□□ -0.25
ZNF407-201ENST00000299687 HEXIM1O94992 359 aaKnown RBP13.51□□□□□ -0.25
ZNF407-201ENST00000299687 GCNT3O95395 438 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 PPARDQ03181 441 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 MRPL44Q9H9J2 332 aaKnown RBP13.51□□□□□ -0.25
ZNF407-201ENST00000299687 PARP2Q9UGN5 583 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 PRPSAP1Q14558 356 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 BMP2KLQ5H9B9 411 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 HP1BP3Q5SSJ5 553 aaPredicted RBP13.51□□□□□ -0.25
ZNF407-201ENST00000299687 LRGUKQ96M69 825 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 NAPGQ99747 312 aaPredicted RBP13.51□□□□□ -0.25
ZNF407-201ENST00000299687 ADPGKQ9BRR6 497 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 RAD50Q92878 1312 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 GOLGA8QA0A0J9YX86 632 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 GOLGA8OA6NCC3 632 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 F8W8V4 182 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 GOLGA8NF8WBI6 632 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
ZNF407-201ENST00000299687 PHLDB3Q6NSJ2 640 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 COPS6Q7L5N1 327 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 CTAGE3PQ8IX95 158 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 RNF169Q8NCN4 708 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 IWS1Q96ST2 819 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.51□□□□□ -0.252e-8■■■■□ 22
ZNF407-201ENST00000299687 MYCT1Q8N699 235 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 RHPN1Q8TCX5 695 aa13.51□□□□□ -0.25
ZNF407-201ENST00000299687 DDX39AO00148 427 aaKnown RBP13.51□□□□□ -0.25
ZNF407-201ENST00000299687 EVCP57679 992 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms