RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 PRKCZQ05513 592 aa16.83■□□□□ 0.28
TMEM41B-201ENST00000299596 FAM110CQ1W6H9 321 aa16.83■□□□□ 0.28
TMEM41B-201ENST00000299596 ANKRD13CQ8N6S4 541 aa16.83■□□□□ 0.28
TMEM41B-201ENST00000299596 ZBTB21Q9ULJ3 1066 aa16.83■□□□□ 0.28
TMEM41B-201ENST00000299596 PHIPQ8WWQ0 1821 aa16.83■□□□□ 0.28
TMEM41B-201ENST00000299596 TNPO2O14787 897 aaKnown RBP16.82■□□□□ 0.28
TMEM41B-201ENST00000299596 GDF11O95390 407 aa16.82■□□□□ 0.28
TMEM41B-201ENST00000299596 ATP5JP18859 108 aa16.82■□□□□ 0.28
TMEM41B-201ENST00000299596 MTMR2Q13614 643 aa16.82■□□□□ 0.28
TMEM41B-201ENST00000299596 TATDN1Q6P1N9 297 aa16.82■□□□□ 0.28
TMEM41B-201ENST00000299596 CRNKL1Q9BZJ0 848 aaKnown RBP16.82■□□□□ 0.28
TMEM41B-201ENST00000299596 LRRCC1Q9C099 1032 aa16.82■□□□□ 0.28
TMEM41B-201ENST00000299596 ASCC2Q9H1I8 757 aaPredicted RBP16.82■□□□□ 0.28
TMEM41B-201ENST00000299596 HOXA7P31268 230 aaPredicted RBP16.81■□□□□ 0.28
TMEM41B-201ENST00000299596 UBXN2AP68543 259 aa16.81■□□□□ 0.28
TMEM41B-201ENST00000299596 SLAIN1Q8ND83 568 aa16.81■□□□□ 0.28
TMEM41B-201ENST00000299596 COA7Q96BR5 231 aa16.81■□□□□ 0.28
TMEM41B-201ENST00000299596 PAG1Q9NWQ8 432 aa16.81■□□□□ 0.28
TMEM41B-201ENST00000299596 BIN2Q9UBW5 565 aaPredicted RBP16.81■□□□□ 0.28
TMEM41B-201ENST00000299596 MYO5AQ9Y4I1 1855 aaKnown RBP16.81■□□□□ 0.28
TMEM41B-201ENST00000299596 ZSWIM8A7E2V4 1837 aa16.81■□□□□ 0.28
TMEM41B-201ENST00000299596 ZNF532Q9HCE3 1301 aa16.81■□□□□ 0.28
TMEM41B-201ENST00000299596 FLT3LGP49771 235 aa16.8■□□□□ 0.28
TMEM41B-201ENST00000299596 BOLA2Q9H3K6 86 aa16.8■□□□□ 0.28
TMEM41B-201ENST00000299596 GABRQQ9UN88 632 aa16.8■□□□□ 0.28
TMEM41B-201ENST00000299596 KIAA0100Q14667 2235 aaKnown RBP16.8■□□□□ 0.28
TMEM41B-201ENST00000299596 PTPRFP10586 1907 aa16.8■□□□□ 0.28
TMEM41B-201ENST00000299596 TCRBV5S4A2TA0A5A2 114 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 GH2P01242 217 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 POLR3DP05423 398 aaPredicted RBP16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 IRX3P78415 501 aaPredicted RBP16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 IRF5Q13568 498 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 MTFR1Q15390 333 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 CERKLQ49MI3 558 aaPredicted RBP16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 NKX2-3Q8TAU0 364 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 PXYLP1Q8TE99 480 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 HAUS7Q99871 368 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.79■□□□□ 0.281e-6■□□□□ 10
TMEM41B-201ENST00000299596 RBBP6Q7Z6E9 1792 aaKnown RBP16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 SIPA1L1O43166 1804 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 FOCADQ5VW36 1801 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 ADCY3O60266 1144 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 PLCD1P51178 756 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 SHROOM1Q2M3G4 852 aaPredicted RBP16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 USP17L2Q6R6M4 530 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 EDC3Q96F86 508 aaKnown RBP16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
TMEM41B-201ENST00000299596 ABCB5Q2M3G0 1257 aa16.78■□□□□ 0.28
TMEM41B-201ENST00000299596 P2RX7Q99572 595 aaKnown RBP16.78■□□□□ 0.28
TMEM41B-201ENST00000299596 MORF4L1Q9UBU8 362 aa16.78■□□□□ 0.28
TMEM41B-201ENST00000299596 TAOK2Q9UL54 1235 aa16.78■□□□□ 0.28
TMEM41B-201ENST00000299596 CDK5RAP2Q96SN8 1893 aa16.77■□□□□ 0.28
TMEM41B-201ENST00000299596 ATAD5Q96QE3 1844 aa16.77■□□□□ 0.28
TMEM41B-201ENST00000299596 LOC285556D6RIA3 1793 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 GJB1P08034 283 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 CCL5P13501 91 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 ADD2P35612 726 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 USP14P54578 494 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 RAB3GAP1Q15042 981 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 LCORLQ8N3X6 602 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 RNF208Q9H0X6 261 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 DCTPP1Q9H773 170 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 DCP1AQ9NPI6 582 aaPredicted RBP16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 EMILIN3Q9NT22 766 aa16.77■□□□□ 0.27
TMEM41B-201ENST00000299596 SHMT1P34896 483 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 GJA8P48165 433 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 HERVK_113P62684 666 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 GABPAQ06546 454 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 UBE3CQ15386 1083 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 ZSCAN25Q6NSZ9 544 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 GTF3C2Q8WUA4 911 aaPredicted RBP16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 SDR42E1Q8WUS8 393 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 C12orf42Q96LP6 360 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 FEZ1Q99689 392 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 ATP8A2Q9NTI2 1148 aa16.76■□□□□ 0.27
TMEM41B-201ENST00000299596 SMARCA5O60264 1052 aaPredicted RBP16.75■□□□□ 0.27
TMEM41B-201ENST00000299596 ELNP15502 786 aa16.75■□□□□ 0.27
TMEM41B-201ENST00000299596 CAPN2P17655 700 aa16.75■□□□□ 0.27
TMEM41B-201ENST00000299596 GPRC5AQ8NFJ5 357 aa16.75■□□□□ 0.27
TMEM41B-201ENST00000299596 KIAA1683Q9H0B3 1180 aa16.75■□□□□ 0.27
TMEM41B-201ENST00000299596 ARMT1Q9H993 441 aa16.75■□□□□ 0.27
TMEM41B-201ENST00000299596 ECHDC1Q9NTX5 307 aa16.75■□□□□ 0.27
TMEM41B-201ENST00000299596 SWAP70Q9UH65 585 aa16.74■□□□□ 0.27
TMEM41B-201ENST00000299596 GJD2Q9UKL4 321 aa16.74■□□□□ 0.27
TMEM41B-201ENST00000299596 MYH1P12882 1939 aa16.74■□□□□ 0.27
TMEM41B-201ENST00000299596 USP17L15C9J2P7 530 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 USP17L13C9JLJ4 530 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 USP17L11C9JVI0 530 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 USP17L18D6R9N7 530 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 USP17L22D6RA61 530 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 USP17L17D6RBQ6 530 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 USP17L19D6RCP7 530 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 USP17L20D6RJB6 530 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 MBD4O95243 580 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 INHAP05111 366 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 USP17L24Q0WX57 530 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 GCC1Q96CN9 775 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 SHISA4Q96DD7 197 aa16.73■□□□□ 0.27
TMEM41B-201ENST00000299596 DDRGK1Q96HY6 314 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms