RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 GREB1LQ9C091 1923 aaPredicted RBP12.24□□□□□ -0.45
COPS2-201ENST00000299259 NMT2O60551 498 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 WDHD1O75717 1129 aaPredicted RBP12.23□□□□□ -0.45
COPS2-201ENST00000299259 CALM1P0DP23 149 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 CALM2P0DP24 149 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 CALM3P0DP25 149 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 IFNAR1P17181 557 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 HDLBPQ00341 1268 aaKnown RBP12.23□□□□□ -0.45
COPS2-201ENST00000299259 PICALMQ13492 652 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 PPP2R5BQ15173 497 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 CAVIN1Q6NZI2 390 aaKnown RBP12.23□□□□□ -0.45
COPS2-201ENST00000299259 TRIM22Q8IYM9 498 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 FANCBQ8NB91 859 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 SLC44A5Q8NCS7 719 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 RGS22Q8NE09 1264 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 ALG1Q9BT22 464 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 SLC26A6Q9BXS9 759 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 USP40Q9NVE5 1235 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 FMNL1O95466 1100 aaPredicted RBP12.23□□□□□ -0.45
COPS2-201ENST00000299259 TSPY3P0CV98 308 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 TSPY8P0CW00 308 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 TFAP4Q01664 338 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 SSRP1Q08945 709 aaKnown RBP12.23□□□□□ -0.45
COPS2-201ENST00000299259 APOBEC3HQ6NTF7 200 aaKnown RBP12.23□□□□□ -0.45
COPS2-201ENST00000299259 CDC42EP5Q6NZY7 148 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 FBXO18Q8NFZ0 1043 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 PIM2Q9P1W9 311 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 MYH4Q9Y623 1939 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 ELP1O95163 1332 aa12.23□□□□□ -0.45
COPS2-201ENST00000299259 GADD45BO75293 160 aaPredicted RBP12.22□□□□□ -0.45
COPS2-201ENST00000299259 RASA1P20936 1047 aa12.22□□□□□ -0.45
COPS2-201ENST00000299259 UBE2HP62256 183 aa12.22□□□□□ -0.45
COPS2-201ENST00000299259 CCDC178Q5BJE1 867 aa12.22□□□□□ -0.45
COPS2-201ENST00000299259 ZNF444Q8N0Y2 327 aaPredicted RBP12.22□□□□□ -0.45
COPS2-201ENST00000299259 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
COPS2-201ENST00000299259 WASF1Q92558 559 aa12.22□□□□□ -0.45
COPS2-201ENST00000299259 MRIQ9BWK5 157 aa12.22□□□□□ -0.45
COPS2-201ENST00000299259 SCAND2PQ9GZW5 306 aaPredicted RBP12.22□□□□□ -0.45
COPS2-201ENST00000299259 DDX4Q9NQI0 724 aaKnown RBP12.22□□□□□ -0.45
COPS2-201ENST00000299259 ZNF277Q9NRM2 450 aaPredicted RBP12.22□□□□□ -0.45
COPS2-201ENST00000299259 RBM28Q9NW13 759 aaKnown RBP12.22□□□□□ -0.45
COPS2-201ENST00000299259 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
COPS2-201ENST00000299259 CDK8P49336 464 aa12.21□□□□□ -0.45
COPS2-201ENST00000299259 TROAPQ12815 778 aa12.21□□□□□ -0.45
COPS2-201ENST00000299259 RCSD1Q6JBY9 416 aa12.21□□□□□ -0.45
COPS2-201ENST00000299259 TTC6Q86TZ1 520 aa12.21□□□□□ -0.45
COPS2-201ENST00000299259 AIFM3Q96NN9 605 aa12.21□□□□□ -0.45
COPS2-201ENST00000299259 OSBPL5Q9H0X9 879 aaPredicted RBP12.21□□□□□ -0.45
COPS2-201ENST00000299259 MYO3BQ8WXR4 1341 aa12.21□□□□□ -0.45
COPS2-201ENST00000299259 RBM5P52756 815 aaKnown RBP eCLIP12.21□□□□□ -0.46
COPS2-201ENST00000299259 TRIM29Q14134 588 aa12.21□□□□□ -0.46
COPS2-201ENST00000299259 DALRD3Q5D0E6 543 aaKnown RBP12.21□□□□□ -0.46
COPS2-201ENST00000299259 OTUD7BQ6GQQ9 843 aa12.21□□□□□ -0.46
COPS2-201ENST00000299259 DGKHQ86XP1 1220 aa12.21□□□□□ -0.46
COPS2-201ENST00000299259 CTCFLQ8NI51 663 aaPredicted RBP12.21□□□□□ -0.46
COPS2-201ENST00000299259 SPATA32Q96LK8 384 aa12.21□□□□□ -0.46
COPS2-201ENST00000299259 VPS33BQ9H267 617 aa12.21□□□□□ -0.46
COPS2-201ENST00000299259 KAT14Q9H8E8 782 aa12.21□□□□□ -0.46
COPS2-201ENST00000299259 TCP11L1Q9NUJ3 509 aa12.21□□□□□ -0.46
COPS2-201ENST00000299259 PLIN4Q96Q06 1357 aa12.21□□□□□ -0.46
COPS2-201ENST00000299259 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.46
COPS2-201ENST00000299259 DEXIO95424 95 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 NBPF11Q86T75 865 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 CRACR2BQ8N4Y2 399 aaPredicted RBP12.2□□□□□ -0.46
COPS2-201ENST00000299259 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
COPS2-201ENST00000299259 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
COPS2-201ENST00000299259 RNF26Q9BY78 433 aaPredicted RBP12.2□□□□□ -0.46
COPS2-201ENST00000299259 IL17RBQ9NRM6 502 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 GJB4Q9NTQ9 266 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
COPS2-201ENST00000299259 PPP1R1BQ9UD71 204 aaPredicted RBP12.2□□□□□ -0.46
COPS2-201ENST00000299259 CFAP45Q9UL16 551 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 HLA-DOAP06340 250 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 ZSCAN23Q3MJ62 389 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 KRT40Q6A162 431 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 ATL3Q6DD88 541 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 BRAPQ7Z569 592 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 ILDR1Q86SU0 546 aaPredicted RBP12.2□□□□□ -0.46
COPS2-201ENST00000299259 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 CMTR1Q8N1G2 835 aaKnown RBP12.2□□□□□ -0.46
COPS2-201ENST00000299259 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 LEO1Q8WVC0 666 aaPredicted RBP12.2□□□□□ -0.46
COPS2-201ENST00000299259 ANKS1AQ92625 1134 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 ZNF396Q96N95 335 aaPredicted RBP12.2□□□□□ -0.46
COPS2-201ENST00000299259 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 TMEM63CQ9P1W3 806 aa12.2□□□□□ -0.46
COPS2-201ENST00000299259 BAZ2BQ9UIF8 2168 aaKnown RBP12.19□□□□□ -0.46
COPS2-201ENST00000299259 PLEKHA8P1O95397 391 aa12.19□□□□□ -0.46
COPS2-201ENST00000299259 KIF23Q02241 960 aaPredicted RBP12.19□□□□□ -0.46
COPS2-201ENST00000299259 GABPAQ06546 454 aa12.19□□□□□ -0.46
COPS2-201ENST00000299259 NFIAQ12857 509 aa12.19□□□□□ -0.46
COPS2-201ENST00000299259 RSBN1LQ6PCB5 846 aaPredicted RBP12.19□□□□□ -0.46
COPS2-201ENST00000299259 TMTC3Q6ZXV5 915 aa12.19□□□□□ -0.46
COPS2-201ENST00000299259 PNMA1Q8ND90 353 aa12.19□□□□□ -0.46
COPS2-201ENST00000299259 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
COPS2-201ENST00000299259 TFIP11Q9UBB9 837 aaKnown RBP12.19□□□□□ -0.46
COPS2-201ENST00000299259 SERPINB13Q9UIV8 391 aa12.19□□□□□ -0.46
COPS2-201ENST00000299259 PCDHAC2Q9Y5I4 1007 aa12.19□□□□□ -0.46
COPS2-201ENST00000299259 CD2APQ9Y5K6 639 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms