RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 LRRC43Q8N309 656 aa17.23■□□□□ 0.35
FNDC1-201ENST00000297267 CCNL1Q9UK58 526 aaPredicted RBP17.23■□□□□ 0.35
FNDC1-201ENST00000297267 HS2ST1Q7LGA3 356 aa17.23■□□□□ 0.35
FNDC1-201ENST00000297267 CABP7Q86V35 215 aa17.23■□□□□ 0.35
FNDC1-201ENST00000297267 DNAJC10Q8IXB1 793 aa17.23■□□□□ 0.35
FNDC1-201ENST00000297267 PPP1R16BQ96T49 567 aa17.23■□□□□ 0.35
FNDC1-201ENST00000297267 PCDHB13Q9Y5F0 798 aa17.23■□□□□ 0.35
FNDC1-201ENST00000297267 EYA2O00167 538 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 PPM1EQ8WY54 764 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 SYNJ2BP-COX16A0A087WUM0 186 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 CNBD1Q8NA66 436 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 RAB3IL1Q8TBN0 382 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 COX16Q9P0S2 106 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 TXNDC16Q9P2K2 825 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 NFE2L3Q9Y4A8 694 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
FNDC1-201ENST00000297267 TCP10L2B9ZVM9 353 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 CASC4Q6P4E1 433 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 RASGRP4Q8TDF6 673 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 SAMD15Q9P1V8 674 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 THRAP3Q9Y2W1 955 aaKnown RBP17.22■□□□□ 0.35
FNDC1-201ENST00000297267 UTP11Q9Y3A2 253 aaKnown RBP17.22■□□□□ 0.35
FNDC1-201ENST00000297267 DEXIO95424 95 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 VAV2P52735 878 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 KAZNQ674X7 775 aa17.22■□□□□ 0.35
FNDC1-201ENST00000297267 ANGEL1Q9UNK9 670 aaKnown RBP17.22■□□□□ 0.35
FNDC1-201ENST00000297267 PLBD2Q8NHP8 589 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 M0R2C6 588 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 ENC1O14682 589 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 TBC1D8O95759 1140 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 IVLP07476 585 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 GNA11P29992 359 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 ADD1P35611 737 aaKnown RBP17.21■□□□□ 0.35
FNDC1-201ENST00000297267 GNAQP50148 359 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 MAP7D1Q3KQU3 841 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 ADCK5Q3MIX3 580 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 FERMT1Q9BQL6 677 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 A2MP01023 1474 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 SGSM2O43147 1006 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 HERC4Q5GLZ8 1057 aaPredicted RBP17.21■□□□□ 0.35
FNDC1-201ENST00000297267 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 C2CD5Q86YS7 1000 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 LMBR1Q8WVP7 490 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 GPR101Q96P66 508 aaPredicted RBP17.21■□□□□ 0.35
FNDC1-201ENST00000297267 PPP1R12CQ9BZL4 782 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 TSGA10Q9BZW7 698 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 GOLGA6CA6NDK9 693 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 GOLGA6DP0CG33 693 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 PROSER3Q2NL68 480 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 SECISBP2LQ93073 1101 aaKnown RBP17.21■□□□□ 0.35
FNDC1-201ENST00000297267 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 PUS3Q9BZE2 481 aaKnown RBP17.21■□□□□ 0.35
FNDC1-201ENST00000297267 GOLGA6AQ9NYA3 693 aa17.21■□□□□ 0.35
FNDC1-201ENST00000297267 KIF22Q14807 665 aa17.21■□□□□ 0.34
FNDC1-201ENST00000297267 PYCARDQ9ULZ3 195 aa17.21■□□□□ 0.34
FNDC1-201ENST00000297267 PTPN22Q9Y2R2 807 aa17.21■□□□□ 0.34
FNDC1-201ENST00000297267 NDUFA8P51970 172 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 TFAP4Q01664 338 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 GAS2L3Q86XJ1 694 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 ARHGEF2Q92974 986 aaKnown RBP17.2■□□□□ 0.34
FNDC1-201ENST00000297267 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 DAPK3O43293 454 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 GABPAQ06546 454 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 ODF2LQ9ULJ1 636 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 MAN1A1P33908 653 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 FOXD4Q12950 439 aaPredicted RBP17.2■□□□□ 0.34
FNDC1-201ENST00000297267 FAM102BQ5T8I3 360 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 IP6K1Q92551 441 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 DPH5Q9H2P9 285 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
FNDC1-201ENST00000297267 WDR44Q5JSH3 913 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 BCL2L12Q9HB09 334 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 SEPT10Q9P0V9 454 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 CRCPO75575 148 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 DCAF5Q96JK2 942 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 TRIM7Q9C029 511 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 SLC52A2Q9HAB3 445 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 CTTNBP2NLQ9P2B4 639 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 DENND2AQ9ULE3 1009 aa17.2■□□□□ 0.34
FNDC1-201ENST00000297267 CNGA4Q8IV77 575 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 SMC6Q96SB8 1091 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 YTHDC2Q9H6S0 1430 aaKnown RBP17.19■□□□□ 0.34
FNDC1-201ENST00000297267 PFKFB1P16118 471 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 SAT1P21673 171 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 ERCC6LQ2NKX8 1250 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 GKAP1Q5VSY0 366 aaPredicted RBP17.19■□□□□ 0.34
FNDC1-201ENST00000297267 SND1Q7KZF4 910 aaKnown RBP eCLIP17.19■□□□□ 0.34
FNDC1-201ENST00000297267 SLC39A2Q9NP94 309 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 ASIC3Q9UHC3 531 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 TAF12Q16514 161 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 INTS8Q75QN2 995 aaKnown RBP17.19■□□□□ 0.34
FNDC1-201ENST00000297267 MARCH10Q8NA82 808 aaPredicted RBP17.19■□□□□ 0.34
FNDC1-201ENST00000297267 NUP153P49790 1475 aaKnown RBP17.19■□□□□ 0.34
FNDC1-201ENST00000297267 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
FNDC1-201ENST00000297267 DPP8Q6V1X1 898 aaPredicted RBP17.19■□□□□ 0.34
FNDC1-201ENST00000297267 SESTD1Q86VW0 696 aa17.19■□□□□ 0.34
FNDC1-201ENST00000297267 U2AF1L4Q8WU68 220 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms