RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 KIF5CO60282 957 aa21.84■■□□□ 1.09
TRA2A-201ENST00000297071 DEXIO95424 95 aa21.84■■□□□ 1.09
TRA2A-201ENST00000297071 BMP15O95972 392 aa21.84■■□□□ 1.09
TRA2A-201ENST00000297071 ADKP55263 362 aaKnown RBP21.84■■□□□ 1.09
TRA2A-201ENST00000297071 CDKAL1Q5VV42 579 aa21.84■■□□□ 1.09
TRA2A-201ENST00000297071 NFXL1Q6ZNB6 911 aa21.84■■□□□ 1.09
TRA2A-201ENST00000297071 SH3RF1Q7Z6J0 888 aa21.84■■□□□ 1.09
TRA2A-201ENST00000297071 TTF2Q9UNY4 1162 aaKnown RBP21.84■■□□□ 1.09
TRA2A-201ENST00000297071 POLR2DO15514 142 aaKnown RBP21.83■■□□□ 1.09
TRA2A-201ENST00000297071 HDXQ7Z353 690 aa21.83■■□□□ 1.09
TRA2A-201ENST00000297071 PPFIBP1Q86W92 1011 aa21.83■■□□□ 1.09
TRA2A-201ENST00000297071 DIS3L2Q8IYB7 885 aaKnown RBP21.83■■□□□ 1.09
TRA2A-201ENST00000297071 VGLL2Q8N8G2 317 aa21.83■■□□□ 1.09
TRA2A-201ENST00000297071 MED15Q96RN5 788 aa21.83■■□□□ 1.09
TRA2A-201ENST00000297071 SLC26A6Q9BXS9 759 aa21.83■■□□□ 1.09
TRA2A-201ENST00000297071 ZNF335Q9H4Z2 1342 aaPredicted RBP21.83■■□□□ 1.08
TRA2A-201ENST00000297071 FOXN1O15353 648 aa21.83■■□□□ 1.08
TRA2A-201ENST00000297071 RPS6KA5O75582 802 aa21.83■■□□□ 1.08
TRA2A-201ENST00000297071 PDE6AP16499 860 aa21.83■■□□□ 1.08
TRA2A-201ENST00000297071 CNGA4Q8IV77 575 aa21.83■■□□□ 1.08
TRA2A-201ENST00000297071 TEX13AQ9BXU3 409 aaPredicted RBP21.83■■□□□ 1.08
TRA2A-201ENST00000297071 MRPL44Q9H9J2 332 aaKnown RBP21.83■■□□□ 1.08
TRA2A-201ENST00000297071 ADD3Q9UEY8 706 aaKnown RBP21.83■■□□□ 1.08
TRA2A-201ENST00000297071 PLCH1Q4KWH8 1693 aa21.82■■□□□ 1.08
TRA2A-201ENST00000297071 EIF3JO75822 258 aaKnown RBP21.82■■□□□ 1.08
TRA2A-201ENST00000297071 PRR29P0C7W0 189 aa21.82■■□□□ 1.08
TRA2A-201ENST00000297071 WHAMMP3Q1A5X7 153 aa21.82■■□□□ 1.08
TRA2A-201ENST00000297071 FILIP1LQ4L180 1135 aa21.82■■□□□ 1.08
TRA2A-201ENST00000297071 METTL24Q5JXM2 366 aa21.82■■□□□ 1.08
TRA2A-201ENST00000297071 BEND6Q5SZJ8 279 aaPredicted RBP21.82■■□□□ 1.08
TRA2A-201ENST00000297071 BTBD18B2RXH4 712 aa21.81■■□□□ 1.08
TRA2A-201ENST00000297071 CAPN2P17655 700 aa21.81■■□□□ 1.08
TRA2A-201ENST00000297071 CUL4BQ13620 913 aa21.81■■□□□ 1.08
TRA2A-201ENST00000297071 GSDMAQ96QA5 445 aa21.81■■□□□ 1.08
TRA2A-201ENST00000297071 PIH1D3Q9NQM4 214 aaKnown RBP21.81■■□□□ 1.08
TRA2A-201ENST00000297071 ZNF532Q9HCE3 1301 aa21.81■■□□□ 1.08
TRA2A-201ENST00000297071 IFIT3O14879 490 aaKnown RBP21.8■■□□□ 1.08
TRA2A-201ENST00000297071 MFAP3LO75121 409 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 GTF2E1P29083 439 aaPredicted RBP21.8■■□□□ 1.08
TRA2A-201ENST00000297071 ST5P78524 1137 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 RAD51AP2Q09MP3 1159 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 TRIM14Q14142 442 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 AKNAD1Q5T1N1 836 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 FAM177A1Q8N128 213 aaPredicted RBP21.8■■□□□ 1.08
TRA2A-201ENST00000297071 ZCRB1Q8TBF4 217 aaKnown RBP21.8■■□□□ 1.08
TRA2A-201ENST00000297071 STAG1Q8WVM7 1258 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 SENP2Q9HC62 589 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 STRN4Q9NRL3 753 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 ADAM21Q9UKJ8 722 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 TOGARAM1Q9Y4F4 1720 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 TOM1O60784 492 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 GNAT2P19087 354 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 PIP4K2BP78356 416 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 SART3Q15020 963 aaKnown RBP21.8■■□□□ 1.08
TRA2A-201ENST00000297071 ZSCAN26Q16670 478 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 RTN1Q16799 776 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 TMTC1Q8IUR5 882 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 ANKZF1Q9H8Y5 726 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 SAMSN1Q9NSI8 373 aaKnown RBP21.8■■□□□ 1.08
TRA2A-201ENST00000297071 ZSWIM5Q9P217 1185 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 DENND2AQ9ULE3 1009 aa21.8■■□□□ 1.08
TRA2A-201ENST00000297071 NUP98P52948 1817 aa21.79■■□□□ 1.08
TRA2A-201ENST00000297071 RAD9BQ6WBX8 426 aa21.79■■□□□ 1.08
TRA2A-201ENST00000297071 IFNL3Q8IZI9 196 aa21.79■■□□□ 1.08
TRA2A-201ENST00000297071 CRACR2BQ8N4Y2 399 aaPredicted RBP21.79■■□□□ 1.08
TRA2A-201ENST00000297071 IGSF22Q8N9C0 903 aa21.79■■□□□ 1.08
TRA2A-201ENST00000297071 NEK11Q8NG66 645 aa21.79■■□□□ 1.08
TRA2A-201ENST00000297071 NKX2-3Q8TAU0 364 aa21.79■■□□□ 1.08
TRA2A-201ENST00000297071 FERMT2Q96AC1 680 aa21.79■■□□□ 1.08
TRA2A-201ENST00000297071 PYM1Q9BRP8 204 aaKnown RBP21.79■■□□□ 1.08
TRA2A-201ENST00000297071 WWC3Q9ULE0 1092 aa21.79■■□□□ 1.08
TRA2A-201ENST00000297071 L1RE1Q9UN81 338 aa21.79■■□□□ 1.08
TRA2A-201ENST00000297071 LRRC10BA6NIK2 292 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 APPP05067 770 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 HSP90AB3PQ58FF7 597 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 KIF6Q6ZMV9 814 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 PROSER2Q86WR7 435 aaPredicted RBP21.78■■□□□ 1.08
TRA2A-201ENST00000297071 TTLL11Q8NHH1 800 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 AIDAQ96BJ3 306 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 FEZ2Q9UHY8 353 aaPredicted RBP21.78■■□□□ 1.08
TRA2A-201ENST00000297071 PNPLA7Q6ZV29 1317 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 SYNRGQ9UMZ2 1314 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 ANKRD18BA2A2Z9 1011 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 CTAGE9A4FU28 777 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 PDE8BO95263 885 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 IVLP07476 585 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 RXRAP19793 462 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 ACTN2P35609 894 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 SPAG1Q07617 926 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 KARSQ15046 597 aaKnown RBP21.78■■□□□ 1.08
TRA2A-201ENST00000297071 PI16Q6UXB8 463 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 LDHAL6AQ6ZMR3 332 aa21.78■■□□□ 1.08
TRA2A-201ENST00000297071 BBXQ8WY36 941 aaPredicted RBP21.78■■□□□ 1.08
TRA2A-201ENST00000297071 RNF26Q9BY78 433 aaPredicted RBP21.78■■□□□ 1.08
TRA2A-201ENST00000297071 LIMA1Q9UHB6 759 aaKnown RBP21.78■■□□□ 1.08
TRA2A-201ENST00000297071 RBL2Q08999 1139 aa21.77■■□□□ 1.08
TRA2A-201ENST00000297071 NAPBQ9H115 298 aa21.77■■□□□ 1.08
TRA2A-201ENST00000297071 EPC1Q9H2F5 836 aa21.77■■□□□ 1.08
TRA2A-201ENST00000297071 SOWAHDA6NJG2 315 aa21.76■■□□□ 1.07
TRA2A-201ENST00000297071 DESI2Q9BSY9 194 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms