RNA–Protein interactions for RNA: ENST00000296783.7

PAPD4-201, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 3,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-201ENST00000296783 UBAP1LF5GYI3 381 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
PAPD4-201ENST00000296783 GRIN1Q05586 938 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 RILPL1Q5EBL4 403 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 IFIT1BQ5T764 474 aaKnown RBP12.09□□□□□ -0.47
PAPD4-201ENST00000296783 METTL16Q86W50 562 aaKnown RBP12.09□□□□□ -0.47
PAPD4-201ENST00000296783 KRI1Q8N9T8 703 aaKnown RBP12.09□□□□□ -0.47
PAPD4-201ENST00000296783 ARID5BQ14865 1188 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 LONRF3Q496Y0 759 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 LRRC8AQ8IWT6 810 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 MYRIPQ8NFW9 859 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 FBXO2Q9UK22 296 aaPredicted RBP12.09□□□□□ -0.47
PAPD4-201ENST00000296783 KCNH3Q9ULD8 1083 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 PCDHB6Q9Y5E3 794 aa12.09□□□□□ -0.47
PAPD4-201ENST00000296783 ORC4O43929 436 aa12.08□□□□□ -0.48
PAPD4-201ENST00000296783 PLEKHA8P1O95397 391 aa12.08□□□□□ -0.48
PAPD4-201ENST00000296783 PTPREP23469 700 aa12.08□□□□□ -0.48
PAPD4-201ENST00000296783 CHAF1AQ13111 956 aaPredicted RBP12.08□□□□□ -0.48
PAPD4-201ENST00000296783 PNOCQ13519 176 aa12.08□□□□□ -0.48
PAPD4-201ENST00000296783 IQCA1Q86XH1 822 aa12.08□□□□□ -0.48
PAPD4-201ENST00000296783 FOXP4Q8IVH2 680 aaPredicted RBP12.08□□□□□ -0.48
PAPD4-201ENST00000296783 HSD3B7Q9H2F3 369 aa12.08□□□□□ -0.48
PAPD4-201ENST00000296783 JAG2Q9Y219 1238 aa12.08□□□□□ -0.48
PAPD4-201ENST00000296783 ZRSR1Q15695 479 aaKnown RBP12.08□□□□□ -0.48
PAPD4-201ENST00000296783 SPECC1Q5M775 1068 aa12.08□□□□□ -0.48
PAPD4-201ENST00000296783 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
PAPD4-201ENST00000296783 PRPF3O43395 683 aaKnown RBP12.07□□□□□ -0.48
PAPD4-201ENST00000296783 NMT2O60551 498 aa12.07□□□□□ -0.48
PAPD4-201ENST00000296783 ISM2Q6H9L7 571 aa12.07□□□□□ -0.48
PAPD4-201ENST00000296783 KRBA2Q6ZNG9 492 aa12.07□□□□□ -0.48
PAPD4-201ENST00000296783 CATIPQ7Z7H3 387 aa12.07□□□□□ -0.48
PAPD4-201ENST00000296783 PHF20Q9BVI0 1012 aa12.07□□□□□ -0.48
PAPD4-201ENST00000296783 CRNKL1Q9BZJ0 848 aaKnown RBP12.07□□□□□ -0.48
PAPD4-201ENST00000296783 VPS54Q9P1Q0 977 aa12.07□□□□□ -0.48
PAPD4-201ENST00000296783 DYNC1I1O14576 645 aa12.07□□□□□ -0.48
PAPD4-201ENST00000296783 CYP2D6P10635 497 aa12.07□□□□□ -0.48
PAPD4-201ENST00000296783 MDM2Q00987 491 aaPredicted RBP12.07□□□□□ -0.48
PAPD4-201ENST00000296783 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
PAPD4-201ENST00000296783 EARS2Q5JPH6 523 aaKnown RBP12.07□□□□□ -0.48
PAPD4-201ENST00000296783 ELOA2Q8IYF1 753 aaPredicted RBP12.07□□□□□ -0.48
PAPD4-201ENST00000296783 RBM28Q9NW13 759 aaKnown RBP12.07□□□□□ -0.48
PAPD4-201ENST00000296783 NFIXQ14938 502 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 TMED8Q6PL24 325 aaPredicted RBP12.06□□□□□ -0.48
PAPD4-201ENST00000296783 CABP5Q9NP86 173 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 MKRN1Q9UHC7 482 aaKnown RBP12.06□□□□□ -0.48
PAPD4-201ENST00000296783 hCG_1642624A0A1W2PR95 340 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 FAM205CA6NFA0 338 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 IKBKBO14920 756 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 DDAH1O94760 285 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 RFC4P35249 363 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 GTF2F1P35269 517 aaKnown RBP eCLIP12.06□□□□□ -0.48
PAPD4-201ENST00000296783 GRAPQ13588 217 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 NPY5RQ15761 445 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 TRAPPC3LQ5T215 181 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 TMTC3Q6ZXV5 915 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 GRAPLQ8TC17 118 aaPredicted RBP12.06□□□□□ -0.48
PAPD4-201ENST00000296783 ARPP21Q9UBL0 812 aaPredicted RBP12.06□□□□□ -0.48
PAPD4-201ENST00000296783 SPATA31A6Q5VVP1 1343 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 CNTNAP5Q8WYK1 1306 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 FOXN1O15353 648 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 CALM1P0DP23 149 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 CALM2P0DP24 149 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 CALM3P0DP25 149 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 FAM47AQ5JRC9 791 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 FAM196AQ6ZSG2 479 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
PAPD4-201ENST00000296783 CNNM3Q8NE01 707 aa12.06□□□□□ -0.48
PAPD4-201ENST00000296783 SRPRBQ9Y5M8 271 aaKnown RBP12.06□□□□□ -0.48
PAPD4-201ENST00000296783 V9GY48 417 aaPredicted RBP12.06□□□□□ -0.48
PAPD4-201ENST00000296783 BMP6P22004 513 aa12.05□□□□□ -0.48
PAPD4-201ENST00000296783 CCZ1BP86790 482 aa12.05□□□□□ -0.48
PAPD4-201ENST00000296783 CCZ1P86791 482 aaPredicted RBP12.05□□□□□ -0.48
PAPD4-201ENST00000296783 FILIP1Q7Z7B0 1213 aa12.05□□□□□ -0.48
PAPD4-201ENST00000296783 XPO4Q9C0E2 1151 aaKnown RBP12.05□□□□□ -0.48
PAPD4-201ENST00000296783 LRRC4BQ9NT99 713 aa12.05□□□□□ -0.48
PAPD4-201ENST00000296783 PCDHA5Q9Y5H7 936 aa12.05□□□□□ -0.48
PAPD4-201ENST00000296783 MORC2Q9Y6X9 1032 aaPredicted RBP12.05□□□□□ -0.48
PAPD4-201ENST00000296783 RRP9O43818 475 aaKnown RBP12.05□□□□□ -0.48
PAPD4-201ENST00000296783 NEMFO60524 1076 aa12.05□□□□□ -0.48
PAPD4-201ENST00000296783 AKAP17AQ02040 695 aaKnown RBP12.05□□□□□ -0.48
PAPD4-201ENST00000296783 SRBD1Q8N5C6 995 aaKnown RBP12.05□□□□□ -0.48
PAPD4-201ENST00000296783 GJD4Q96KN9 370 aaPredicted RBP12.05□□□□□ -0.48
PAPD4-201ENST00000296783 OSBPL5Q9H0X9 879 aaPredicted RBP12.05□□□□□ -0.48
PAPD4-201ENST00000296783 SMTNL1A8MU46 457 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 WNT7AO00755 349 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 RCSD1Q6JBY9 416 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 TNFRSF25Q93038 417 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 IFNKQ9P0W0 207 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 BAZ2BQ9UIF8 2168 aaKnown RBP12.04□□□□□ -0.48
PAPD4-201ENST00000296783 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 USP17L8P0C7I0 530 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 XBP1P17861 261 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 KRT2P35908 639 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 GRIK5Q16478 980 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
PAPD4-201ENST00000296783 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 LEMD3Q9Y2U8 911 aa12.04□□□□□ -0.48
PAPD4-201ENST00000296783 POLR2DO15514 142 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms