RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SEPT12Q8IYM1 358 aa10.71□□□□□ -0.7
PRDM9-201ENST00000296682 ZNF622Q969S3 477 aaKnown RBP eCLIP10.71□□□□□ -0.7
PRDM9-201ENST00000296682 TMX4Q9H1E5 349 aaPredicted RBP10.71□□□□□ -0.7
PRDM9-201ENST00000296682 IFNKQ9P0W0 207 aa10.71□□□□□ -0.7
PRDM9-201ENST00000296682 LRRC37AA6NMS7 1700 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 GNAT2P19087 354 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 CASP1P29466 404 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 TFAP4Q01664 338 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 ADALQ6DHV7 355 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 CPLX3Q8WVH0 158 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 THRAP3Q9Y2W1 955 aaKnown RBP10.7□□□□□ -0.7
PRDM9-201ENST00000296682 FOXN1O15353 648 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 BSDC1Q9NW68 430 aaPredicted RBP10.7□□□□□ -0.7
PRDM9-201ENST00000296682 MCM7P33993 719 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 UBE4AQ14139 1066 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 BRAPQ7Z569 592 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 TRMT44Q8IYL2 757 aaKnown RBP10.7□□□□□ -0.7
PRDM9-201ENST00000296682 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 GPKOWQ92917 476 aaPredicted RBP eCLIP10.7□□□□□ -0.7
PRDM9-201ENST00000296682 MAPK8IP1Q9UQF2 711 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 LTBP1Q14766 1721 aa10.7□□□□□ -0.7
PRDM9-201ENST00000296682 TCRBV5S4A2TA0A5A2 114 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 MPHOSPH10O00566 681 aaKnown RBP10.69□□□□□ -0.7
PRDM9-201ENST00000296682 RPS6KA4O75676 772 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 GRIN1Q05586 938 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 GOLGA8FQ08AF8 430 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 GOLGA8DPQ0D2H9 430 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 ZSCAN29Q8IWY8 852 aaPredicted RBP10.69□□□□□ -0.7
PRDM9-201ENST00000296682 WASF1Q92558 559 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 KAT14Q9H8E8 782 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 PCDHB6Q9Y5E3 794 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 TACC3Q9Y6A5 838 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 VWA3AA6NCI4 1184 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 CTAGE5O15320 804 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 ZNF75DP51815 510 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 PDE4BQ07343 736 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 DOK7Q18PE1 504 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 ATL3Q6DD88 541 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 PIK3AP1Q6ZUJ8 805 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 ZBTB9Q96C00 473 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 EEF2KMTQ96G04 330 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 QTRT2Q9H974 415 aaKnown RBP10.69□□□□□ -0.7
PRDM9-201ENST00000296682 BRMS1Q9HCU9 246 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 RTEL1Q9NZ71 1219 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 NARFQ9UHQ1 456 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 KCNH3Q9ULD8 1083 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 CDK5RAP2Q96SN8 1893 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 USP17L3A6NCW0 530 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 USP17L4A6NCW7 530 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 USP17L1Q7RTZ2 530 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 HEATR3Q7Z4Q2 680 aa10.69□□□□□ -0.7
PRDM9-201ENST00000296682 ZSCAN10Q96SZ4 725 aaPredicted RBP10.69□□□□□ -0.7
PRDM9-201ENST00000296682 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.68□□□□□ -0.7
PRDM9-201ENST00000296682 KIAA1468Q9P260 1216 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.68□□□□□ -0.7
PRDM9-201ENST00000296682 V9GYY5 206 aaPredicted RBP10.68□□□□□ -0.7
PRDM9-201ENST00000296682 BTAF1O14981 1849 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 MARCH6O60337 910 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 SCNN1DP51172 638 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 GTF2IP78347 998 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 USP49Q70CQ1 688 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 NOSTRINQ8IVI9 506 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 DUOX1Q9NRD9 1551 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 SKILP12757 684 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 LONRF3Q496Y0 759 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 CLEC4GQ6UXB4 293 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 ENAHQ8N8S7 591 aaPredicted RBP10.68□□□□□ -0.7
PRDM9-201ENST00000296682 BCL2L12Q9HB09 334 aa10.68□□□□□ -0.7
PRDM9-201ENST00000296682 MORC2Q9Y6X9 1032 aaPredicted RBP10.68□□□□□ -0.7
PRDM9-201ENST00000296682 SRCAPQ6ZRS2 3230 aa10.67□□□□□ -0.7
PRDM9-201ENST00000296682 ATP1A3P13637 1013 aa10.67□□□□□ -0.7
PRDM9-201ENST00000296682 NOM1Q5C9Z4 860 aaKnown RBP10.67□□□□□ -0.7
PRDM9-201ENST00000296682 TMTC2Q8N394 836 aa10.67□□□□□ -0.7
PRDM9-201ENST00000296682 ANKRD2Q9GZV1 360 aa10.67□□□□□ -0.7
PRDM9-201ENST00000296682 PPP1R1BQ9UD71 204 aaPredicted RBP10.67□□□□□ -0.7
PRDM9-201ENST00000296682 SERTAD1Q9UHV2 236 aa10.67□□□□□ -0.7
PRDM9-201ENST00000296682 TNRC6CQ9HCJ0 1690 aaKnown RBP10.67□□□□□ -0.7
PRDM9-201ENST00000296682 SNW1Q13573 536 aaKnown RBP10.67□□□□□ -0.7
PRDM9-201ENST00000296682 CTR9Q6PD62 1173 aa10.67□□□□□ -0.7
PRDM9-201ENST00000296682 KRI1Q8N9T8 703 aaKnown RBP10.67□□□□□ -0.7
PRDM9-201ENST00000296682 CACTINQ8WUQ7 758 aaKnown RBP10.67□□□□□ -0.7
PRDM9-201ENST00000296682 ZNF646O15015 1829 aaPredicted RBP10.67□□□□□ -0.7
PRDM9-201ENST00000296682 NRDCO43847 1150 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 DEXIO95424 95 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 SERPINB2P05120 415 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 TNNT1P13805 278 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 SLC39A14Q15043 492 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 GRIK5Q16478 980 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 CCDC144BQ3MJ40 725 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 MFSD14BQ5SR56 506 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 CRACR2BQ8N4Y2 399 aaPredicted RBP10.66□□□□□ -0.7
PRDM9-201ENST00000296682 SH3RF3Q8TEJ3 882 aaPredicted RBP10.66□□□□□ -0.7
PRDM9-201ENST00000296682 CCDC88AQ3V6T2 1871 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 AFF2P51816 1311 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 TRIM75PA6NK02 468 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 BAG3O95817 575 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 TEX11Q8IYF3 940 aa10.66□□□□□ -0.7
PRDM9-201ENST00000296682 FMR1NBQ8N0W7 255 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms