RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 M0QZ92 97 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 MYZAPP0CAP1 466 aa19.89■□□□□ 0.77
CDC42EP3-201ENST00000295324 PRAMEF22A3QJZ6 481 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 DDX39AO00148 427 aaKnown RBP19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 PNMA1Q8ND90 353 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 KCNH3Q9ULD8 1083 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 POTEB2H3BUK9 544 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 UBXN1Q04323 297 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 ABCB5Q2M3G0 1257 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 CCDC42Q96M95 316 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 C16orf45Q96MC5 204 aaPredicted RBP19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 JCADQ9P266 1359 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 HSPD1P10809 573 aaKnown RBP19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 ARID5AQ03989 594 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 TRIM6Q9C030 488 aaPredicted RBP19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 SMCO2A6NFE2 343 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 ALAS1P13196 640 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 GRAPQ13588 217 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 ARHGEF6Q15052 776 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 CEP135Q66GS9 1140 aa19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 GRAPLQ8TC17 118 aaPredicted RBP19.88■□□□□ 0.77
CDC42EP3-201ENST00000295324 KRT83P78385 493 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 DBNDD1Q9H9R9 158 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 NCAPD2Q15021 1401 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 ADRA2BP18089 450 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 DCAF17Q5H9S7 520 aaPredicted RBP19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 SPECC1Q5M775 1068 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 PABPN1LA6NDY0 278 aaKnown RBP19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 MCF2L2Q86YR7 1114 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 FNBP4Q8N3X1 1017 aaPredicted RBP19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 PDCL2Q8N4E4 241 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 MASTLQ96GX5 879 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 A0A0D9SFI3 127 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 TMX1Q9H3N1 280 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 SWAP70Q9UH65 585 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 RGS22Q8NE09 1264 aa19.87■□□□□ 0.77
CDC42EP3-201ENST00000295324 SEC24BO95487 1268 aa19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 SELENOOQ9BVL4 669 aa19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 SLC8A3P57103 927 aa19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 DDX12PQ92771 950 aa19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 GJD4Q96KN9 370 aaPredicted RBP19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 TNKSO95271 1327 aa19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 TACC1O75410 805 aa19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 SLFN13Q68D06 897 aa19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 CSRNP1Q96S65 589 aa19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 ZNF274Q96GC6 653 aaPredicted RBP19.86■□□□□ 0.77
CDC42EP3-201ENST00000295324 OVOS2A0A0G2JMS6 1433 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 OVOS2A0A0J9YW53 1432 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 OVOS2Q6IE36 1432 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 ADORA1P30542 326 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 GLG1Q92896 1179 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 CLRN2A0PK11 232 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 CETN3O15182 167 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 FLOT1O75955 427 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 CALUO43852 315 aaPredicted RBP19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 FGAP02671 866 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 ZNF853P0CG23 659 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 PTGS1P23219 599 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 KIF5AQ12840 1032 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 ANKRD35Q8N283 1001 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 VPS54Q9P1Q0 977 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 NARFQ9UHQ1 456 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 DBNLQ9UJU6 430 aaKnown RBP19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 KLRF2D3W0D1 207 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 ARHGEF16Q5VV41 709 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 FBXO11Q86XK2 927 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 IQGAP3Q86VI3 1631 aa19.85■□□□□ 0.77
CDC42EP3-201ENST00000295324 CCDC117Q8IWD4 279 aaPredicted RBP19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 FANCBQ8NB91 859 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 PSTPIP2Q9H939 334 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 PIM2Q9P1W9 311 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 LUC7L2Q9Y383 392 aaKnown RBP19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 GAS7O60861 476 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 POLR2MP0CAP2 368 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 EEF2P13639 858 aaKnown RBP19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 MYL5Q02045 173 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 TRPC3Q13507 836 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 SLC27A3Q5K4L6 730 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 LRRC47Q8N1G4 583 aaKnown RBP19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 MLXIPQ9HAP2 919 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 KCNJ14Q9UNX9 436 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 CKAP4Q07065 602 aaKnown RBP19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 CIAPIN1Q6FI81 312 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 SSH2Q76I76 1423 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 CCNA1P78396 465 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 HERC4Q5GLZ8 1057 aaPredicted RBP19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 OTUD6AQ7L8S5 288 aa19.84■□□□□ 0.77
CDC42EP3-201ENST00000295324 SEC62Q99442 399 aaKnown RBP19.83■□□□□ 0.77
CDC42EP3-201ENST00000295324 NT5C3AQ9H0P0 336 aa19.83■□□□□ 0.77
CDC42EP3-201ENST00000295324 hCG_1642624A0A1W2PR95 340 aa19.83■□□□□ 0.77
CDC42EP3-201ENST00000295324 KDM2BQ8NHM5 1336 aa19.83■□□□□ 0.77
CDC42EP3-201ENST00000295324 FSD2A1L4K1 749 aa19.83■□□□□ 0.76
CDC42EP3-201ENST00000295324 KRT86O43790 486 aa19.83■□□□□ 0.76
CDC42EP3-201ENST00000295324 SKILP12757 684 aa19.83■□□□□ 0.76
CDC42EP3-201ENST00000295324 SUSD4Q5VX71 490 aa19.83■□□□□ 0.76
CDC42EP3-201ENST00000295324 RAD17O75943 681 aa19.83■□□□□ 0.76
CDC42EP3-201ENST00000295324 CDC42BPAQ5VT25 1732 aa19.83■□□□□ 0.76
CDC42EP3-201ENST00000295324 DDAH1O94760 285 aa19.83■□□□□ 0.76
CDC42EP3-201ENST00000295324 DHX37Q8IY37 1157 aaKnown RBP19.83■□□□□ 0.76
CDC42EP3-201ENST00000295324 HACE1Q8IYU2 909 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms