RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 SWAP70Q9UH65 585 aa20.99■□□□□ 0.95
CCDC78-201ENST00000293889 RANBP6O60518 1105 aaKnown RBP20.98■□□□□ 0.95
CCDC78-201ENST00000293889 RASA1P20936 1047 aa20.98■□□□□ 0.95
CCDC78-201ENST00000293889 SHMT1P34896 483 aa20.98■□□□□ 0.95
CCDC78-201ENST00000293889 CST9Q5W186 159 aa20.98■□□□□ 0.95
CCDC78-201ENST00000293889 CHST3Q7LGC8 479 aa20.98■□□□□ 0.95
CCDC78-201ENST00000293889 ESR2Q92731 530 aa20.98■□□□□ 0.95
CCDC78-201ENST00000293889 TCEANC2Q96MN5 208 aa20.98■□□□□ 0.95
CCDC78-201ENST00000293889 TRIM34Q9BYJ4 488 aa20.98■□□□□ 0.95
CCDC78-201ENST00000293889 ZSWIM5Q9P217 1185 aa20.98■□□□□ 0.95
CCDC78-201ENST00000293889 HERC5Q9UII4 1024 aaKnown RBP20.98■□□□□ 0.95
CCDC78-201ENST00000293889 TAOK2Q9UL54 1235 aa20.98■□□□□ 0.95
CCDC78-201ENST00000293889 MCM5P33992 734 aa20.97■□□□□ 0.95
CCDC78-201ENST00000293889 ANTXR2P58335 489 aa20.97■□□□□ 0.95
CCDC78-201ENST00000293889 NFKBIBQ15653 356 aa20.97■□□□□ 0.95
CCDC78-201ENST00000293889 NBPF12Q5TAG4 269 aaPredicted RBP20.97■□□□□ 0.95
CCDC78-201ENST00000293889 PRC1O43663 620 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 FAM47AQ5JRC9 791 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 MIGA2Q7L4E1 593 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 ZNF444Q8N0Y2 327 aaPredicted RBP20.96■□□□□ 0.95
CCDC78-201ENST00000293889 TTC14Q96N46 770 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 ZNF408Q9H9D4 720 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.96■□□□□ 0.95
CCDC78-201ENST00000293889 PDRG1Q9NUG6 133 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 SSC5DA1L4H1 1573 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 TBC1D12O60347 775 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 MAP3K10Q02779 954 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 LRRC2Q9BYS8 371 aa20.96■□□□□ 0.95
CCDC78-201ENST00000293889 CELF2O95319 508 aaKnown RBP20.95■□□□□ 0.94
CCDC78-201ENST00000293889 APLP1P51693 650 aa20.95■□□□□ 0.94
CCDC78-201ENST00000293889 TFAP4Q01664 338 aa20.95■□□□□ 0.94
CCDC78-201ENST00000293889 TATDN1Q6P1N9 297 aa20.95■□□□□ 0.94
CCDC78-201ENST00000293889 TSPY2A6NKD2 308 aa20.94■□□□□ 0.94
CCDC78-201ENST00000293889 NT5C2P49902 561 aa20.94■□□□□ 0.94
CCDC78-201ENST00000293889 WDR19Q8NEZ3 1342 aa20.94■□□□□ 0.94
CCDC78-201ENST00000293889 ST18O60284 1047 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 CD2BP2O95400 341 aaKnown RBP20.93■□□□□ 0.94
CCDC78-201ENST00000293889 BECN1Q14457 450 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 ZKSCAN3Q9BRR0 538 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 TSPY3P0CV98 308 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 TSPY8P0CW00 308 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 AKR1B1P15121 316 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 HSPA6P17066 643 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 SLC4A3P48751 1232 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 AK2P54819 239 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 RRP1BQ14684 758 aaKnown RBP20.93■□□□□ 0.94
CCDC78-201ENST00000293889 SUPT20HL1Q3ZLR7 823 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 CERKLQ49MI3 558 aaPredicted RBP20.93■□□□□ 0.94
CCDC78-201ENST00000293889 Q6ZUG5 572 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 HOOK2Q96ED9 719 aa20.93■□□□□ 0.94
CCDC78-201ENST00000293889 ALDH8A1Q9H2A2 487 aaPredicted RBP20.93■□□□□ 0.94
CCDC78-201ENST00000293889 GPHNQ9NQX3 736 aaPredicted RBP20.93■□□□□ 0.94
CCDC78-201ENST00000293889 TMEM88BA6NKF7 163 aa20.92■□□□□ 0.94
CCDC78-201ENST00000293889 HTRA3P83110 453 aa20.92■□□□□ 0.94
CCDC78-201ENST00000293889 IL27Q8NEV9 243 aa20.92■□□□□ 0.94
CCDC78-201ENST00000293889 NEDD1Q8NHV4 660 aa20.92■□□□□ 0.94
CCDC78-201ENST00000293889 IGDCC4Q8TDY8 1250 aa20.92■□□□□ 0.94
CCDC78-201ENST00000293889 CCDC17Q96LX7 622 aa20.92■□□□□ 0.94
CCDC78-201ENST00000293889 FZD1Q9UP38 647 aa20.92■□□□□ 0.94
CCDC78-201ENST00000293889 PAPPA2Q9BXP8 1791 aa20.92■□□□□ 0.94
CCDC78-201ENST00000293889 MYH8P13535 1937 aa20.91■□□□□ 0.94
CCDC78-201ENST00000293889 IFIT3O14879 490 aaKnown RBP20.91■□□□□ 0.94
CCDC78-201ENST00000293889 NMT2O60551 498 aa20.91■□□□□ 0.94
CCDC78-201ENST00000293889 TOB2Q14106 344 aaPredicted RBP20.91■□□□□ 0.94
CCDC78-201ENST00000293889 SHROOM1Q2M3G4 852 aaPredicted RBP20.91■□□□□ 0.94
CCDC78-201ENST00000293889 DCAF15Q66K64 600 aa20.91■□□□□ 0.94
CCDC78-201ENST00000293889 IQCA1Q86XH1 822 aa20.91■□□□□ 0.94
CCDC78-201ENST00000293889 TMEM87BQ96K49 555 aa20.91■□□□□ 0.94
CCDC78-201ENST00000293889 ZSCAN10Q96SZ4 725 aaPredicted RBP20.91■□□□□ 0.94
CCDC78-201ENST00000293889 UBAC1Q9BSL1 405 aa20.91■□□□□ 0.94
CCDC78-201ENST00000293889 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCDC78-201ENST00000293889 IL17RBQ9NRM6 502 aa20.91■□□□□ 0.94
CCDC78-201ENST00000293889 PHF20L1A8MW92 1017 aa20.9■□□□□ 0.94
CCDC78-201ENST00000293889 SH2B2O14492 632 aaPredicted RBP20.9■□□□□ 0.94
CCDC78-201ENST00000293889 FGD1P98174 961 aa20.9■□□□□ 0.94
CCDC78-201ENST00000293889 TMEM67Q5HYA8 995 aa20.9■□□□□ 0.94
CCDC78-201ENST00000293889 MOB2Q70IA6 237 aa20.9■□□□□ 0.94
CCDC78-201ENST00000293889 FBXL16Q8N461 479 aa20.9■□□□□ 0.94
CCDC78-201ENST00000293889 LARP6Q9BRS8 491 aaKnown RBP20.9■□□□□ 0.94
CCDC78-201ENST00000293889 TCP11L1Q9NUJ3 509 aa20.9■□□□□ 0.94
CCDC78-201ENST00000293889 OTOFQ9HC10 1997 aa20.9■□□□□ 0.94
CCDC78-201ENST00000293889 MPHOSPH10O00566 681 aaKnown RBP20.89■□□□□ 0.94
CCDC78-201ENST00000293889 GDF11O95390 407 aa20.89■□□□□ 0.94
CCDC78-201ENST00000293889 JAG1P78504 1218 aa20.89■□□□□ 0.94
CCDC78-201ENST00000293889 SART3Q15020 963 aaKnown RBP20.89■□□□□ 0.94
CCDC78-201ENST00000293889 SNX21Q969T3 373 aa20.89■□□□□ 0.94
CCDC78-201ENST00000293889 MTA3Q9BTC8 594 aa20.89■□□□□ 0.94
CCDC78-201ENST00000293889 AGXT2Q9BYV1 514 aa20.89■□□□□ 0.94
CCDC78-201ENST00000293889 GBA2Q9HCG7 927 aaPredicted RBP20.89■□□□□ 0.94
CCDC78-201ENST00000293889 CREBZFQ9NS37 354 aa20.89■□□□□ 0.94
CCDC78-201ENST00000293889 TNKSO95271 1327 aa20.89■□□□□ 0.93
CCDC78-201ENST00000293889 PRKG1Q13976 671 aa20.89■□□□□ 0.93
CCDC78-201ENST00000293889 SEC23AQ15436 765 aa20.89■□□□□ 0.93
CCDC78-201ENST00000293889 ABCB5Q2M3G0 1257 aa20.89■□□□□ 0.93
CCDC78-201ENST00000293889 NOL8Q76FK4 1167 aaKnown RBP20.89■□□□□ 0.93
CCDC78-201ENST00000293889 ENAHQ8N8S7 591 aaPredicted RBP20.89■□□□□ 0.93
CCDC78-201ENST00000293889 BRF1Q92994 677 aa20.89■□□□□ 0.93
CCDC78-201ENST00000293889 ZNF341Q9BYN7 854 aa20.89■□□□□ 0.93
CCDC78-201ENST00000293889 LY9Q9HBG7 655 aa20.89■□□□□ 0.93
CCDC78-201ENST00000293889 SENP2Q9HC62 589 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms