RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 IGSF1Q8N6C5 1336 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 ARHGEF35A5YM69 484 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 ALDH1B1P30837 517 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 SLC1A4P43007 532 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 RPS8P62241 208 aaKnown RBP14.28□□□□□ -0.12
PTCD1-201ENST00000292478 ZNF654Q8IZM8 581 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 FBF1Q8TES7 1133 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 STK32BQ9NY57 414 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 VPS18Q9P253 973 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 LTKP29376 864 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 CCDC121Q6ZUS5 278 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 TRIML1Q8N9V2 468 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 SECISBP2LQ93073 1101 aaKnown RBP14.28□□□□□ -0.12
PTCD1-201ENST00000292478 SSX2IPQ9Y2D8 614 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 TMOD4Q9NZQ9 345 aa14.27□□□□□ -0.12
PTCD1-201ENST00000292478 KDM3AQ9Y4C1 1321 aa14.27□□□□□ -0.12
PTCD1-201ENST00000292478 PICK1Q9NRD5 415 aa14.27□□□□□ -0.12
PTCD1-201ENST00000292478 ZBTB21Q9ULJ3 1066 aa14.27□□□□□ -0.12
PTCD1-201ENST00000292478 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.27□□□□□ -0.12
PTCD1-201ENST00000292478 ZNF521Q96K83 1311 aa14.27□□□□□ -0.13
PTCD1-201ENST00000292478 TFAP4Q01664 338 aa14.27□□□□□ -0.13
PTCD1-201ENST00000292478 IFNL3Q8IZI9 196 aa14.27□□□□□ -0.13
PTCD1-201ENST00000292478 GPR161Q8N6U8 529 aaKnown RBP14.27□□□□□ -0.13
PTCD1-201ENST00000292478 ATP8A2Q9NTI2 1148 aa14.27□□□□□ -0.13
PTCD1-201ENST00000292478 A0A0D9SFI3 127 aa14.27□□□□□ -0.13
PTCD1-201ENST00000292478 ACTN4O43707 911 aaKnown RBP14.27□□□□□ -0.13
PTCD1-201ENST00000292478 LIN9Q5TKA1 542 aa14.27□□□□□ -0.13
PTCD1-201ENST00000292478 UBE3CQ15386 1083 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 UBL4BQ8N7F7 174 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 NELFBQ8WX92 580 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 ZSCAN10Q96SZ4 725 aaPredicted RBP14.26□□□□□ -0.13
PTCD1-201ENST00000292478 NLRP1Q9C000 1473 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 PRDM15P57071 1507 aaPredicted RBP14.26□□□□□ -0.13
PTCD1-201ENST00000292478 HSPD1P10809 573 aaKnown RBP14.26□□□□□ -0.13
PTCD1-201ENST00000292478 GJC1P36383 396 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 NOSTRINQ8IVI9 506 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 REXO1Q8N1G1 1221 aaKnown RBP14.26□□□□□ -0.13
PTCD1-201ENST00000292478 SELENOSQ9BQE4 189 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 H0YIN7 160 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 STX10O60499 249 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 PTH1RQ03431 593 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 MYRIPQ8NFW9 859 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.26□□□□□ -0.13
PTCD1-201ENST00000292478 CEP63Q96MT8 703 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 KIAA1468Q9P260 1216 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 MED23Q9ULK4 1368 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 PREX2Q70Z35 1606 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 CCDC14Q49A88 953 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 FAM212AQ96EL1 285 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 PAIP2Q9BPZ3 127 aaKnown RBP14.26□□□□□ -0.13
PTCD1-201ENST00000292478 MYL10Q9BUA6 226 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 MTMR6Q9Y217 621 aa14.26□□□□□ -0.13
PTCD1-201ENST00000292478 DDAH1O94760 285 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 CMA1P23946 247 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 SNX16P57768 344 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 C8orf74Q6P047 294 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 TMEM63CQ9P1W3 806 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 ADCY9O60503 1353 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 MSL1Q68DK7 614 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 IFT20Q8IY31 132 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 SYCE1Q8N0S2 351 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 KCNJ14Q9UNX9 436 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 NDC80O14777 642 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 PDE6AP16499 860 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 KRT9P35527 623 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 STRN3Q13033 797 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 NCAPH2Q6IBW4 605 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 ZBED4O75132 1171 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 HERC4Q5GLZ8 1057 aaPredicted RBP14.25□□□□□ -0.13
PTCD1-201ENST00000292478 CDAN1Q8IWY9 1227 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 RPGRIP1Q96KN7 1286 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 KCNQ3O43525 872 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 ALDH3A1P30838 453 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 BIRC3Q13489 604 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 MAP4K1Q92918 833 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 WWC3Q9ULE0 1092 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 KIF1BO60333 1816 aa14.25□□□□□ -0.13
PTCD1-201ENST00000292478 ATP2B4P23634 1241 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 RBM6P78332 1123 aaKnown RBP14.24□□□□□ -0.13
PTCD1-201ENST00000292478 CPLX4Q7Z7G2 160 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 MAK16Q9BXY0 300 aaKnown RBP14.24□□□□□ -0.13
PTCD1-201ENST00000292478 LSG1Q9H089 658 aaKnown RBP14.24□□□□□ -0.13
PTCD1-201ENST00000292478 NDUFB9Q9Y6M9 179 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 SPOPO43791 374 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 TGFBRAP1Q8WUH2 860 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 SAMD15Q9P1V8 674 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 YEATS2Q9ULM3 1422 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 SEMA3EO15041 775 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 KRT5P13647 590 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 PFKFB1P16118 471 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 OTUD6BQ8N6M0 293 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 TRERF1Q96PN7 1200 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 ATG3Q9NT62 314 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 TPCN1Q9ULQ1 816 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 USP6P35125 1406 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 FLOT1O75955 427 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 MAGEA1P43355 309 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 MAPKAPK5Q8IW41 473 aa14.24□□□□□ -0.13
PTCD1-201ENST00000292478 FANCBQ8NB91 859 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms