RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 HLA-DOAP06340 250 aa30.71■■■□□ 2.51
U2AF1-201ENST00000291552 CLASRPQ8N2M8 674 aaKnown RBP30.71■■■□□ 2.51
U2AF1-201ENST00000291552 HMMRO75330 724 aa30.7■■■□□ 2.51
U2AF1-201ENST00000291552 FLT3LGP49771 235 aa30.7■■■□□ 2.51
U2AF1-201ENST00000291552 BACE1P56817 501 aa30.7■■■□□ 2.51
U2AF1-201ENST00000291552 TMED8Q6PL24 325 aaPredicted RBP30.7■■■□□ 2.51
U2AF1-201ENST00000291552 CERS3Q8IU89 383 aa30.7■■■□□ 2.51
U2AF1-201ENST00000291552 TRIM34Q9BYJ4 488 aa30.7■■■□□ 2.51
U2AF1-201ENST00000291552 TNPO2O14787 897 aaKnown RBP30.69■■■□□ 2.5
U2AF1-201ENST00000291552 PDE6AP16499 860 aa30.69■■■□□ 2.5
U2AF1-201ENST00000291552 USP5P45974 858 aa30.69■■■□□ 2.5
U2AF1-201ENST00000291552 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.69■■■□□ 2.5
U2AF1-201ENST00000291552 CCL5P13501 91 aa30.68■■■□□ 2.5
U2AF1-201ENST00000291552 SLAIN1Q8ND83 568 aa30.68■■■□□ 2.5
U2AF1-201ENST00000291552 EDC3Q96F86 508 aaKnown RBP30.68■■■□□ 2.5
U2AF1-201ENST00000291552 GINM1Q9NU53 330 aa30.68■■■□□ 2.5
U2AF1-201ENST00000291552 ADCY3O60266 1144 aa30.67■■■□□ 2.5
U2AF1-201ENST00000291552 ELNP15502 786 aa30.67■■■□□ 2.5
U2AF1-201ENST00000291552 PABPC4Q13310 644 aaKnown RBP eCLIP30.67■■■□□ 2.5
U2AF1-201ENST00000291552 EHD4Q9H223 541 aa30.67■■■□□ 2.5
U2AF1-201ENST00000291552 TCRBV5S4A2TA0A5A2 114 aa30.66■■■□□ 2.5
U2AF1-201ENST00000291552 GOLIM4O00461 696 aa30.66■■■□□ 2.5
U2AF1-201ENST00000291552 RAB11FIP3O75154 756 aa30.66■■■□□ 2.5
U2AF1-201ENST00000291552 IFIT2P09913 472 aaKnown RBP30.66■■■□□ 2.5
U2AF1-201ENST00000291552 GCLCP48506 637 aaPredicted RBP30.66■■■□□ 2.5
U2AF1-201ENST00000291552 IRF5Q13568 498 aa30.66■■■□□ 2.5
U2AF1-201ENST00000291552 TTF1Q15361 905 aaPredicted RBP30.66■■■□□ 2.5
U2AF1-201ENST00000291552 TATDN1Q6P1N9 297 aa30.66■■■□□ 2.5
U2AF1-201ENST00000291552 DNAJC2Q99543 621 aaKnown RBP30.66■■■□□ 2.5
U2AF1-201ENST00000291552 BAZ2AQ9UIF9 1905 aaKnown RBP30.66■■■□□ 2.5
U2AF1-201ENST00000291552 GH2P01242 217 aa30.65■■■□□ 2.5
U2AF1-201ENST00000291552 SLC9C2Q5TAH2 1124 aa30.65■■■□□ 2.5
U2AF1-201ENST00000291552 UNC93B1Q9H1C4 597 aa30.65■■■□□ 2.5
U2AF1-201ENST00000291552 BIN2Q9UBW5 565 aaPredicted RBP30.65■■■□□ 2.5
U2AF1-201ENST00000291552 MYH8P13535 1937 aa30.65■■■□□ 2.5
U2AF1-201ENST00000291552 MAGEB6P1A0A0J9YX57 407 aa30.64■■■□□ 2.5
U2AF1-201ENST00000291552 USP17L10C9JJH3 530 aa30.64■■■□□ 2.5
U2AF1-201ENST00000291552 PEX10O60683 326 aa30.64■■■□□ 2.5
U2AF1-201ENST00000291552 HOXA7P31268 230 aaPredicted RBP30.64■■■□□ 2.5
U2AF1-201ENST00000291552 EVX2Q03828 476 aa30.64■■■□□ 2.5
U2AF1-201ENST00000291552 BCL11AQ9H165 835 aa30.64■■■□□ 2.5
U2AF1-201ENST00000291552 MORF4L1Q9UBU8 362 aa30.64■■■□□ 2.5
U2AF1-201ENST00000291552 SERPINB13Q9UIV8 391 aa30.64■■■□□ 2.5
U2AF1-201ENST00000291552 ZNF532Q9HCE3 1301 aa30.64■■■□□ 2.5
U2AF1-201ENST00000291552 C19orf81C9J6K1 198 aa30.63■■■□□ 2.49
U2AF1-201ENST00000291552 GJB1P08034 283 aa30.63■■■□□ 2.49
U2AF1-201ENST00000291552 PLCD1P51178 756 aa30.63■■■□□ 2.49
U2AF1-201ENST00000291552 UBXN2AP68543 259 aa30.63■■■□□ 2.49
U2AF1-201ENST00000291552 PDE3AQ14432 1141 aa30.63■■■□□ 2.49
U2AF1-201ENST00000291552 PXYLP1Q8TE99 480 aa30.63■■■□□ 2.49
U2AF1-201ENST00000291552 RNF208Q9H0X6 261 aa30.63■■■□□ 2.49
U2AF1-201ENST00000291552 EMILIN3Q9NT22 766 aa30.63■■■□□ 2.49
U2AF1-201ENST00000291552 TMOD4Q9NZQ9 345 aa30.63■■■□□ 2.49
U2AF1-201ENST00000291552 INHAP05111 366 aa30.62■■■□□ 2.49
U2AF1-201ENST00000291552 SHMT1P34896 483 aa30.62■■■□□ 2.49
U2AF1-201ENST00000291552 GJA8P48165 433 aa30.62■■■□□ 2.49
U2AF1-201ENST00000291552 P2RX7Q99572 595 aaKnown RBP30.62■■■□□ 2.49
U2AF1-201ENST00000291552 IRX3P78415 501 aaPredicted RBP30.61■■■□□ 2.49
U2AF1-201ENST00000291552 SLFNL1Q499Z3 407 aa30.61■■■□□ 2.49
U2AF1-201ENST00000291552 UBE2Q1Q7Z7E8 422 aa30.61■■■□□ 2.49
U2AF1-201ENST00000291552 TTC6Q86TZ1 520 aa30.61■■■□□ 2.49
U2AF1-201ENST00000291552 LCORLQ8N3X6 602 aa30.61■■■□□ 2.49
U2AF1-201ENST00000291552 COA7Q96BR5 231 aa30.61■■■□□ 2.49
U2AF1-201ENST00000291552 CHMP4BQ9H444 224 aaKnown RBP30.61■■■□□ 2.49
U2AF1-201ENST00000291552 TXNRD2Q9NNW7 524 aa30.61■■■□□ 2.49
U2AF1-201ENST00000291552 HERVK_113P62684 666 aa30.6■■■□□ 2.49
U2AF1-201ENST00000291552 POTEEQ6S8J3 1075 aa30.6■■■□□ 2.49
U2AF1-201ENST00000291552 BOLA2Q9H3K6 86 aa30.6■■■□□ 2.49
U2AF1-201ENST00000291552 GABPAQ06546 454 aa30.59■■■□□ 2.49
U2AF1-201ENST00000291552 PAG1Q9NWQ8 432 aa30.59■■■□□ 2.49
U2AF1-201ENST00000291552 GJD2Q9UKL4 321 aa30.59■■■□□ 2.49
U2AF1-201ENST00000291552 ATP5JP18859 108 aa30.58■■■□□ 2.49
U2AF1-201ENST00000291552 NKX2-3Q8TAU0 364 aa30.58■■■□□ 2.49
U2AF1-201ENST00000291552 SDR42E1Q8WUS8 393 aa30.58■■■□□ 2.49
U2AF1-201ENST00000291552 C12orf42Q96LP6 360 aa30.58■■■□□ 2.49
U2AF1-201ENST00000291552 CRNKL1Q9BZJ0 848 aaKnown RBP30.58■■■□□ 2.49
U2AF1-201ENST00000291552 TAOK2Q9UL54 1235 aa30.58■■■□□ 2.49
U2AF1-201ENST00000291552 CHGBP05060 677 aa30.57■■■□□ 2.48
U2AF1-201ENST00000291552 GUCY1A2P33402 732 aa30.57■■■□□ 2.48
U2AF1-201ENST00000291552 CERKLQ49MI3 558 aaPredicted RBP30.57■■■□□ 2.48
U2AF1-201ENST00000291552 USP17L2Q6R6M4 530 aa30.57■■■□□ 2.48
U2AF1-201ENST00000291552 U2AF1L4Q8WU68 220 aaKnown RBP30.57■■■□□ 2.48
U2AF1-201ENST00000291552 SMARCA5O60264 1052 aaPredicted RBP30.56■■■□□ 2.48
U2AF1-201ENST00000291552 ADD2P35612 726 aa30.56■■■□□ 2.48
U2AF1-201ENST00000291552 ZYXQ15942 572 aaKnown RBP30.56■■■□□ 2.48
U2AF1-201ENST00000291552 ABCB5Q2M3G0 1257 aa30.56■■■□□ 2.48
U2AF1-201ENST00000291552 ACER1Q8TDN7 264 aa30.56■■■□□ 2.48
U2AF1-201ENST00000291552 HAUS7Q99871 368 aa30.56■■■□□ 2.48
U2AF1-201ENST00000291552 ARMT1Q9H993 441 aa30.56■■■□□ 2.48
U2AF1-201ENST00000291552 DCP1AQ9NPI6 582 aaPredicted RBP30.56■■■□□ 2.48
U2AF1-201ENST00000291552 RBPJLQ9UBG7 517 aa30.56■■■□□ 2.48
U2AF1-201ENST00000291552 CYP2D6P10635 497 aa30.55■■■□□ 2.48
U2AF1-201ENST00000291552 RAB3GAP1Q15042 981 aa30.55■■■□□ 2.48
U2AF1-201ENST00000291552 MCM9Q9NXL9 1143 aa30.55■■■□□ 2.48
U2AF1-201ENST00000291552 ALPK3Q96L96 1907 aa30.55■■■□□ 2.48
U2AF1-201ENST00000291552 POLR3DP05423 398 aaPredicted RBP30.54■■■□□ 2.48
U2AF1-201ENST00000291552 PAK6Q9NQU5 681 aaPredicted RBP30.54■■■□□ 2.48
U2AF1-201ENST00000291552 RLFQ13129 1914 aa30.53■■■□□ 2.48
U2AF1-201ENST00000291552 TRIOBPQ9H2D6 2365 aa30.53■■■□□ 2.48
U2AF1-201ENST00000291552 PRKAB2O43741 272 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms