RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 METTL16Q86W50 562 aaKnown RBP10.82□□□□□ -0.68
TFF1-201ENST00000291527 ITPRIPQ8IWB1 547 aa10.82□□□□□ -0.68
TFF1-201ENST00000291527 PROCA1Q8NCQ7 364 aaPredicted RBP10.82□□□□□ -0.68
TFF1-201ENST00000291527 SLAIN1Q8ND83 568 aa10.82□□□□□ -0.68
TFF1-201ENST00000291527 SMCR8Q8TEV9 937 aaPredicted RBP10.82□□□□□ -0.68
TFF1-201ENST00000291527 GCC1Q96CN9 775 aa10.82□□□□□ -0.68
TFF1-201ENST00000291527 PRO3102Q9H379 93 aa10.82□□□□□ -0.68
TFF1-201ENST00000291527 EMILIN3Q9NT22 766 aa10.82□□□□□ -0.68
TFF1-201ENST00000291527 BAZ2AQ9UIF9 1905 aaKnown RBP10.82□□□□□ -0.68
TFF1-201ENST00000291527 DDX60LQ5H9U9 1706 aaKnown RBP10.81□□□□□ -0.68
TFF1-201ENST00000291527 FARP2O94887 1054 aaPredicted RBP10.81□□□□□ -0.68
TFF1-201ENST00000291527 IRF5Q13568 498 aa10.81□□□□□ -0.68
TFF1-201ENST00000291527 SIRT2Q8IXJ6 389 aa10.81□□□□□ -0.68
TFF1-201ENST00000291527 EDC3Q96F86 508 aaKnown RBP10.81□□□□□ -0.68
TFF1-201ENST00000291527 WDR18Q9BV38 432 aa10.81□□□□□ -0.68
TFF1-201ENST00000291527 CRISPLD2Q9H0B8 497 aa10.81□□□□□ -0.68
TFF1-201ENST00000291527 PORCNQ9H237 461 aa10.81□□□□□ -0.68
TFF1-201ENST00000291527 IL1RAPL2Q9NP60 686 aa10.81□□□□□ -0.68
TFF1-201ENST00000291527 PAK6Q9NQU5 681 aaPredicted RBP10.81□□□□□ -0.68
TFF1-201ENST00000291527 PI4KBQ9UBF8 816 aa10.81□□□□□ -0.68
TFF1-201ENST00000291527 RBPJLQ9UBG7 517 aa10.81□□□□□ -0.68
TFF1-201ENST00000291527 RLFQ13129 1914 aa10.81□□□□□ -0.68
TFF1-201ENST00000291527 SOX1O00570 391 aaPredicted RBP10.8□□□□□ -0.68
TFF1-201ENST00000291527 CNMDO75829 334 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 TFRCP02786 760 aaKnown RBP10.8□□□□□ -0.68
TFF1-201ENST00000291527 GUCY1A2P33402 732 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 PLCD1P51178 756 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 BACE1P56817 501 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 UBXN2AP68543 259 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 ZYXQ15942 572 aaKnown RBP10.8□□□□□ -0.68
TFF1-201ENST00000291527 CCL14Q16627 93 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 FAM110CQ1W6H9 321 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 CCDC158Q5M9N0 1113 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 MAGEB6Q8N7X4 407 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 ACER1Q8TDN7 264 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 PXYLP1Q8TE99 480 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 TRIB2Q92519 343 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 PAWRQ96IZ0 340 aaKnown RBP10.8□□□□□ -0.68
TFF1-201ENST00000291527 BCL11AQ9H165 835 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 ZBTB21Q9ULJ3 1066 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 NAV1Q8NEY1 1877 aa10.8□□□□□ -0.68
TFF1-201ENST00000291527 FRMPD3Q5JV73 1810 aa10.79□□□□□ -0.68
TFF1-201ENST00000291527 APBB1O00213 710 aa10.79□□□□□ -0.68
TFF1-201ENST00000291527 IDH1O75874 414 aaKnown RBP10.79□□□□□ -0.68
TFF1-201ENST00000291527 GH2P01242 217 aa10.79□□□□□ -0.68
TFF1-201ENST00000291527 CYP2D6P10635 497 aa10.79□□□□□ -0.68
TFF1-201ENST00000291527 CYP2B6P20813 491 aa10.79□□□□□ -0.68
TFF1-201ENST00000291527 KIAA1755Q5JYT7 1200 aa10.79□□□□□ -0.68
TFF1-201ENST00000291527 ZNF512BQ96KM6 892 aaPredicted RBP10.79□□□□□ -0.68
TFF1-201ENST00000291527 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.79□□□□□ -0.68
TFF1-201ENST00000291527 MORF4L1Q9UBU8 362 aa10.79□□□□□ -0.68
TFF1-201ENST00000291527 STAP2Q9UGK3 403 aa10.79□□□□□ -0.68
TFF1-201ENST00000291527 HERC5Q9UII4 1024 aaKnown RBP10.79□□□□□ -0.68
TFF1-201ENST00000291527 ZNFX1Q9P2E3 1918 aaKnown RBP10.79□□□□□ -0.68
TFF1-201ENST00000291527 EYSQ5T1H1 3165 aa10.79□□□□□ -0.68
TFF1-201ENST00000291527 MAP4K4O95819 1239 aaPredicted RBP10.78□□□□□ -0.68
TFF1-201ENST00000291527 HOXA7P31268 230 aaPredicted RBP10.78□□□□□ -0.68
TFF1-201ENST00000291527 HERVK_113P62684 666 aa10.78□□□□□ -0.68
TFF1-201ENST00000291527 AACSQ86V21 672 aa10.78□□□□□ -0.68
TFF1-201ENST00000291527 FOXP4Q8IVH2 680 aaPredicted RBP10.78□□□□□ -0.68
TFF1-201ENST00000291527 USP6NLQ92738 828 aa10.78□□□□□ -0.68
TFF1-201ENST00000291527 COA7Q96BR5 231 aa10.78□□□□□ -0.68
TFF1-201ENST00000291527 RIOK1Q9BRS2 568 aaKnown RBP10.78□□□□□ -0.68
TFF1-201ENST00000291527 FLRT1Q9NZU1 646 aa10.78□□□□□ -0.68
TFF1-201ENST00000291527 SMCHD1A6NHR9 2005 aa10.77□□□□□ -0.68
TFF1-201ENST00000291527 USP17L10C9JJH3 530 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 BAG3O95817 575 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 CCND3P30281 292 aaPredicted RBP10.77□□□□□ -0.69
TFF1-201ENST00000291527 SHMT1P34896 483 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 GCLCP48506 637 aaPredicted RBP10.77□□□□□ -0.69
TFF1-201ENST00000291527 TATDN1Q6P1N9 297 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 FTSJ3Q8IY81 847 aaKnown RBP10.77□□□□□ -0.69
TFF1-201ENST00000291527 CRACR2BQ8N4Y2 399 aaPredicted RBP10.77□□□□□ -0.69
TFF1-201ENST00000291527 SLC44A5Q8NCS7 719 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 NKX2-3Q8TAU0 364 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 LRCH3Q96II8 777 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 PAGR1Q9BTK6 254 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 DHX36Q9H2U1 1008 aaKnown RBP10.77□□□□□ -0.69
TFF1-201ENST00000291527 BTBD7Q9P203 1132 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 PNMA3Q9UL41 463 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 ZMYND8Q9ULU4 1186 aaPredicted RBP10.77□□□□□ -0.69
TFF1-201ENST00000291527 MYH8P13535 1937 aa10.77□□□□□ -0.69
TFF1-201ENST00000291527 UNC80Q8N2C7 3258 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 A0A1W2PRG0 241 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 TCRBV5S4A2TA0A5A2 114 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 PRKAB2O43741 272 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 ASNSP08243 561 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 IRX3P78415 501 aaPredicted RBP10.76□□□□□ -0.69
TFF1-201ENST00000291527 CACNB2Q08289 660 aaPredicted RBP10.76□□□□□ -0.69
TFF1-201ENST00000291527 MAP3K21Q5TCX8 1036 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 C20orf194Q5TEA3 1177 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 CLEC10AQ8IUN9 316 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 NOL10Q9BSC4 688 aaKnown RBP10.76□□□□□ -0.69
TFF1-201ENST00000291527 COL11A1P12107 1806 aaPredicted RBP10.76□□□□□ -0.69
TFF1-201ENST00000291527 PARP14Q460N5 1801 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 PFASO15067 1338 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 MYH7P12883 1935 aa10.76□□□□□ -0.69
TFF1-201ENST00000291527 CYP2D7A0A087X1C5 515 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 HMGCRP04035 888 aa10.75□□□□□ -0.69
TFF1-201ENST00000291527 PLCG2P16885 1265 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms