RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 CNNM1Q9NRU3 951 aa23.22■■□□□ 1.31
TMED4-201ENST00000289577 ANKRD18BA2A2Z9 1011 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 MAP2K7O14733 419 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 CTDSPL2Q05D32 466 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 RTN1Q16799 776 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 LONRF2Q1L5Z9 754 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 AKNAD1Q5T1N1 836 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 RAD9BQ6WBX8 426 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 CCDC34Q96HJ3 373 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 IRX2Q9BZI1 471 aaPredicted RBP23.21■■□□□ 1.31
TMED4-201ENST00000289577 KRT23Q9C075 422 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 CEP131Q9UPN4 1083 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 TEX33O43247 280 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 DEXIO95424 95 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 ATF3P18847 181 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 SPATA1Q5VX52 437 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 HNRNPLLQ8WVV9 542 aaKnown RBP23.21■■□□□ 1.31
TMED4-201ENST00000289577 NAPBQ9H115 298 aa23.21■■□□□ 1.31
TMED4-201ENST00000289577 CTSWP56202 376 aa23.2■■□□□ 1.3
TMED4-201ENST00000289577 GPS2Q13227 327 aa23.2■■□□□ 1.3
TMED4-201ENST00000289577 USP49Q70CQ1 688 aa23.2■■□□□ 1.3
TMED4-201ENST00000289577 CRACR2BQ8N4Y2 399 aaPredicted RBP23.2■■□□□ 1.3
TMED4-201ENST00000289577 CSRNP2Q9H175 543 aa23.2■■□□□ 1.3
TMED4-201ENST00000289577 A0A0U1RQG5 324 aaPredicted RBP23.2■■□□□ 1.3
TMED4-201ENST00000289577 CHMP4BP1P59074 171 aa23.2■■□□□ 1.3
TMED4-201ENST00000289577 NR5A1Q13285 461 aa23.2■■□□□ 1.3
TMED4-201ENST00000289577 STRN4Q9NRL3 753 aa23.2■■□□□ 1.3
TMED4-201ENST00000289577 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
TMED4-201ENST00000289577 RBL2Q08999 1139 aa23.19■■□□□ 1.3
TMED4-201ENST00000289577 CUL4BQ13620 913 aa23.19■■□□□ 1.3
TMED4-201ENST00000289577 TUBB2AQ13885 445 aa23.19■■□□□ 1.3
TMED4-201ENST00000289577 TUBB2BQ9BVA1 445 aa23.19■■□□□ 1.3
TMED4-201ENST00000289577 PSD3Q9NYI0 1048 aa23.19■■□□□ 1.3
TMED4-201ENST00000289577 ADD3Q9UEY8 706 aaKnown RBP23.19■■□□□ 1.3
TMED4-201ENST00000289577 CDC23Q9UJX2 597 aa23.19■■□□□ 1.3
TMED4-201ENST00000289577 ZNF330Q9Y3S2 320 aaPredicted RBP23.19■■□□□ 1.3
TMED4-201ENST00000289577 RCAN1P53805 252 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 CDKAL1Q5VV42 579 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 GIGYF2Q6Y7W6 1299 aaKnown RBP23.18■■□□□ 1.3
TMED4-201ENST00000289577 RASGRP2Q7LDG7 609 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 NLRP10Q86W26 655 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 IGSF22Q8N9C0 903 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 MTA3Q9BTC8 594 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 AATFQ9NY61 560 aaKnown RBP eCLIP23.18■■□□□ 1.3
TMED4-201ENST00000289577 RAB21Q9UL25 225 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 CAPN2P17655 700 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 FECHP22830 423 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 USP5P45974 858 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 MFSD6Q6ZSS7 791 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 SH3RF1Q7Z6J0 888 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 PPFIBP1Q86W92 1011 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 CEP112Q8N8E3 955 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 OXER1Q8TDS5 423 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 STAG1Q8WVM7 1258 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 EXOC4Q96A65 974 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 SHANK3Q9BYB0 1731 aa23.18■■□□□ 1.3
TMED4-201ENST00000289577 GSG1L2A8MUP6 293 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 SEMA3EO15041 775 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 KIF5CO60282 957 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 MBD4O95243 580 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 SLC20A2Q08357 652 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 MSANTD4Q8NCY6 345 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 ANKZF1Q9H8Y5 726 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 LZTFL1Q9NQ48 299 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 CCDC196A0A1B0GTZ2 297 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 POTEB2H3BUK9 544 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 MFAP3LO75121 409 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 CD44P16070 742 aaKnown RBP23.17■■□□□ 1.3
TMED4-201ENST00000289577 WTAPQ15007 396 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 MSL3Q8N5Y2 521 aaKnown RBP23.17■■□□□ 1.3
TMED4-201ENST00000289577 DOCK2Q92608 1830 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 MYH3P11055 1940 aa23.17■■□□□ 1.3
TMED4-201ENST00000289577 DCCP43146 1447 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 H3BQF6 201 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 FGFR2P21802 821 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 TUBB4BP68371 445 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 BEND6Q5SZJ8 279 aaPredicted RBP23.16■■□□□ 1.3
TMED4-201ENST00000289577 CTAGE1Q96RT6 745 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 ARAP2Q8WZ64 1704 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 SYNRGQ9UMZ2 1314 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 A0A087X0B3 334 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 A0A0U1RQJ8 604 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 SART3Q15020 963 aaKnown RBP23.16■■□□□ 1.3
TMED4-201ENST00000289577 TOM1L2Q6ZVM7 507 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 TMTC2Q8N394 836 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 MAGEB6Q8N7X4 407 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 ATRIPQ8WXE1 791 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 CCDC51Q96ER9 411 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 ARMT1Q9H993 441 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 CABP5Q9NP86 173 aa23.16■■□□□ 1.3
TMED4-201ENST00000289577 HLFQ16534 295 aa23.15■■□□□ 1.3
TMED4-201ENST00000289577 SPATA5Q8NB90 893 aa23.15■■□□□ 1.3
TMED4-201ENST00000289577 LPIN2Q92539 896 aa23.15■■□□□ 1.3
TMED4-201ENST00000289577 RAD51AP2Q09MP3 1159 aa23.14■■□□□ 1.3
TMED4-201ENST00000289577 MAP3K12Q12852 859 aa23.14■■□□□ 1.3
TMED4-201ENST00000289577 PUM3Q15397 648 aaKnown RBP23.14■■□□□ 1.3
TMED4-201ENST00000289577 FANCBQ8NB91 859 aa23.14■■□□□ 1.3
TMED4-201ENST00000289577 PAGE5Q96GU1 130 aa23.14■■□□□ 1.3
TMED4-201ENST00000289577 ADAM21Q9UKJ8 722 aa23.14■■□□□ 1.3
TMED4-201ENST00000289577 ITIH6Q6UXX5 1313 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms