RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 SPDYE6P0CI01 402 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 PLCG2P16885 1265 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 EIF6P56537 245 aaKnown RBP11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 STK3Q13188 491 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 C12orf60Q5U649 245 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 GIMAP6Q6P9H5 292 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 TIAM2Q8IVF5 1701 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 ASTN2O75129 1339 aaPredicted RBP11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 IGSF3O75054 1194 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 POLR3DP05423 398 aaPredicted RBP11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 FGD1P98174 961 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 TRDNQ13061 729 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 TNIP1Q15025 636 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 ME3Q16798 604 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 RAB11FIP4Q86YS3 637 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 NECAB1Q8N987 351 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 AGBL3Q8NEM8 1001 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 STAG1Q8WVM7 1258 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 TSC1Q92574 1164 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 ARPP21Q9UBL0 812 aaPredicted RBP11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 NMT2O60551 498 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 MCM2P49736 904 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 APOBRQ0VD83 1088 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 DLGAP5Q15398 846 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 FAM47AQ5JRC9 791 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 MRIQ9BWK5 157 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 MYOZ2Q9NPC6 264 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 ANAPC4Q9UJX5 808 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 DDTLA6NHG4 134 aaPredicted RBP11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 TCP10L2B9ZVM9 353 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 WNT10BO00744 389 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 RANBP6O60518 1105 aaKnown RBP11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 PPFIA3O75145 1194 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 DDNO94850 711 aaPredicted RBP11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 TBC1D10BQ4KMP7 808 aaPredicted RBP11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 SBK1Q52WX2 424 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 C9orf131Q5VYM1 1079 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 CDAN1Q8IWY9 1227 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 CNOT7Q9UIV1 285 aaKnown RBP11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
LRTOMT-201ENST00000289488 HMGB1P09429 215 aaKnown RBP11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 ST3GAL1Q11201 340 aa11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 CUL4AQ13619 759 aa11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 SH3BP5LQ7L8J4 393 aa11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 OSBPL5Q9H0X9 879 aaPredicted RBP11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 HDAC9Q9UKV0 1011 aa11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 NAP1L2Q9ULW6 460 aaPredicted RBP11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 BAZ2BQ9UIF8 2168 aaKnown RBP11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 FOXD4L5Q5VV16 416 aaPredicted RBP11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 FOXD4L4Q8WXT5 416 aaPredicted RBP11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 MYH8P13535 1937 aa11.29□□□□□ -0.6
LRTOMT-201ENST00000289488 SIPA1L1O43166 1804 aa11.28□□□□□ -0.6
LRTOMT-201ENST00000289488 RXRAP19793 462 aa11.28□□□□□ -0.6
LRTOMT-201ENST00000289488 EPS15P42566 896 aa11.28□□□□□ -0.6
LRTOMT-201ENST00000289488 CERS3Q8IU89 383 aa11.28□□□□□ -0.6
LRTOMT-201ENST00000289488 CCDC83Q8IWF9 413 aa11.28□□□□□ -0.6
LRTOMT-201ENST00000289488 ZSCAN29Q8IWY8 852 aaPredicted RBP11.28□□□□□ -0.6
LRTOMT-201ENST00000289488 PDCL2Q8N4E4 241 aa11.28□□□□□ -0.6
LRTOMT-201ENST00000289488 USP25Q9UHP3 1055 aa11.28□□□□□ -0.6
LRTOMT-201ENST00000289488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
LRTOMT-201ENST00000289488 SHROOM1Q2M3G4 852 aaPredicted RBP11.27□□□□□ -0.6
LRTOMT-201ENST00000289488 IGDCC4Q8TDY8 1250 aa11.27□□□□□ -0.6
LRTOMT-201ENST00000289488 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.6
LRTOMT-201ENST00000289488 ZNF830Q96NB3 372 aaPredicted RBP11.27□□□□□ -0.6
LRTOMT-201ENST00000289488 MYL10Q9BUA6 226 aa11.27□□□□□ -0.6
LRTOMT-201ENST00000289488 TTC12Q9H892 705 aaPredicted RBP11.27□□□□□ -0.6
LRTOMT-201ENST00000289488 NCOA5Q9HCD5 579 aaKnown RBP11.27□□□□□ -0.6
LRTOMT-201ENST00000289488 ZNF70Q9UC06 446 aaPredicted RBP11.27□□□□□ -0.6
LRTOMT-201ENST00000289488 ADCY5O95622 1261 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 FGRP09769 529 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 CDK8P49336 464 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 CCT2P78371 535 aaKnown RBP11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 ANKRD7Q92527 254 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 CHMP4CQ96CF2 233 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 IDI2Q9BXS1 227 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 AGXT2Q9BYV1 514 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 KRT23Q9C075 422 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 TMEM39BQ9GZU3 492 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 RNF41Q9H4P4 317 aaPredicted RBP11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 MKNK2Q9HBH9 465 aa11.27□□□□□ -0.61
LRTOMT-201ENST00000289488 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
LRTOMT-201ENST00000289488 ZNF280AP59817 542 aaPredicted RBP11.26□□□□□ -0.61
LRTOMT-201ENST00000289488 PDE4BQ07343 736 aa11.26□□□□□ -0.61
LRTOMT-201ENST00000289488 TMEM67Q5HYA8 995 aa11.26□□□□□ -0.61
LRTOMT-201ENST00000289488 AMOTL1Q8IY63 956 aa11.26□□□□□ -0.61
LRTOMT-201ENST00000289488 CCDC144CPQ8IYA2 1237 aa11.26□□□□□ -0.61
LRTOMT-201ENST00000289488 GPC2Q8N158 579 aa11.26□□□□□ -0.61
LRTOMT-201ENST00000289488 TRPM4Q8TD43 1214 aa11.26□□□□□ -0.61
LRTOMT-201ENST00000289488 ESR2Q92731 530 aa11.26□□□□□ -0.61
LRTOMT-201ENST00000289488 ZBED3Q96IU2 234 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms