RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FBXO2Q9UK22 296 aaPredicted RBP11.84□□□□□ -0.51
SKA1-201ENST00000285116 MROH5Q6ZUA9 1318 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 MYH2Q9UKX2 1941 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 GOLGA8AA7E2F4 631 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 ERCC5P28715 1186 aaPredicted RBP11.84□□□□□ -0.51
SKA1-201ENST00000285116 LONRF3Q496Y0 759 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 RSRC2Q7L4I2 434 aaKnown RBP11.84□□□□□ -0.51
SKA1-201ENST00000285116 SRLQ86TD4 932 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 C10orf67Q8IYJ2 551 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 STK11IPQ8N1F8 1099 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 CNNM3Q8NE01 707 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 CCDC34Q96HJ3 373 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 ADAM21Q9UKJ8 722 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 PCDHA5Q9Y5H7 936 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 ZNF532Q9HCE3 1301 aa11.84□□□□□ -0.51
SKA1-201ENST00000285116 VWA3AA6NCI4 1184 aa11.83□□□□□ -0.51
SKA1-201ENST00000285116 PPFIA3O75145 1194 aa11.83□□□□□ -0.51
SKA1-201ENST00000285116 GNAT2P19087 354 aa11.83□□□□□ -0.51
SKA1-201ENST00000285116 BMP6P22004 513 aa11.83□□□□□ -0.51
SKA1-201ENST00000285116 ITGA6P23229 1130 aa11.83□□□□□ -0.51
SKA1-201ENST00000285116 NOP2P46087 812 aaKnown RBP11.83□□□□□ -0.51
SKA1-201ENST00000285116 STAG1Q8WVM7 1258 aa11.83□□□□□ -0.51
SKA1-201ENST00000285116 AIFM3Q96NN9 605 aa11.83□□□□□ -0.51
SKA1-201ENST00000285116 UTP14AQ9BVJ6 771 aaKnown RBP11.83□□□□□ -0.51
SKA1-201ENST00000285116 ASAP1Q9ULH1 1129 aa11.83□□□□□ -0.51
SKA1-201ENST00000285116 PPP2R2CQ9Y2T4 447 aa11.83□□□□□ -0.51
SKA1-201ENST00000285116 ACTN2P35609 894 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 PPP2R3AQ06190 1150 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 CFAP100Q494V2 611 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 PI16Q6UXB8 463 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 TMTC2Q8N394 836 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 FANCLQ9NW38 375 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 MAN1B1Q9UKM7 699 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 B4E1Z4 1266 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 ERVV-1B6SEH8 477 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 SEMA3EO15041 775 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 IVLP07476 585 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 LMAN1P49257 510 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 TOB1P50616 345 aaPredicted RBP11.83□□□□□ -0.52
SKA1-201ENST00000285116 GNL2Q13823 731 aaKnown RBP11.83□□□□□ -0.52
SKA1-201ENST00000285116 POSTNQ15063 836 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 PUM3Q15397 648 aaKnown RBP11.83□□□□□ -0.52
SKA1-201ENST00000285116 TMEM67Q5HYA8 995 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 GOLGA6L1Q8N7Z2 621 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 NKX2-3Q8TAU0 364 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 LPIN2Q92539 896 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 PARD6BQ9BYG5 372 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 YY1AP1Q9H869 796 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 LCMT1Q9UIC8 334 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 WWC3Q9ULE0 1092 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 CEP131Q9UPN4 1083 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 SRPRBQ9Y5M8 271 aaKnown RBP11.83□□□□□ -0.52
SKA1-201ENST00000285116 MRFAP1Q9Y605 127 aa11.83□□□□□ -0.52
SKA1-201ENST00000285116 RTL9Q8NET4 1388 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 CCDC151A5D8V7 595 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 TRIM66O15016 1216 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 STARD3NLO95772 234 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 SPECC1LQ69YQ0 1117 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 TC2NQ8N9U0 490 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 GOLGA1Q92805 767 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 FAM89AQ96GI7 184 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 PANX2Q96RD6 677 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 NAA15Q9BXJ9 866 aaKnown RBP11.82□□□□□ -0.52
SKA1-201ENST00000285116 EPC1Q9H2F5 836 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 RRP15Q9Y3B9 282 aaKnown RBP11.82□□□□□ -0.52
SKA1-201ENST00000285116 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 CCDC196A0A1B0GTZ2 297 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 PDE8AO60658 829 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 FECHP22830 423 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 TUBB2AQ13885 445 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 BRD3Q15059 726 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 SAFBQ15424 915 aaKnown RBP eCLIP11.82□□□□□ -0.52
SKA1-201ENST00000285116 NOM1Q5C9Z4 860 aaKnown RBP11.82□□□□□ -0.52
SKA1-201ENST00000285116 AKNAD1Q5T1N1 836 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 BAG1Q99933 345 aaPredicted RBP11.82□□□□□ -0.52
SKA1-201ENST00000285116 TUBB2BQ9BVA1 445 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 GREM2Q9H772 168 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 EPB41L4AQ9HCS5 686 aaPredicted RBP11.82□□□□□ -0.52
SKA1-201ENST00000285116 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
SKA1-201ENST00000285116 A0A1B0GTH6 734 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 DEXIO95424 95 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 PLCD1P51178 756 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 TUBB4BP68371 445 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 PDE4BQ07343 736 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 LONRF2Q1L5Z9 754 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 LEKR1Q6ZMV7 388 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 IFNL3Q8IZI9 196 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 MSL3Q8N5Y2 521 aaKnown RBP11.81□□□□□ -0.52
SKA1-201ENST00000285116 PHKBQ93100 1093 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 CLIC6Q96NY7 704 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 SENP2Q9HC62 589 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 MAP2K7O14733 419 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 ACTN4O43707 911 aaKnown RBP11.81□□□□□ -0.52
SKA1-201ENST00000285116 TXLNAP40222 546 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 GNG11P61952 73 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 NR1I3Q14994 352 aa11.81□□□□□ -0.52
SKA1-201ENST00000285116 MICU3Q86XE3 530 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms