RNA–Protein interactions for RNA: ENST00000284136.10

SEMA3D-201, Transcript of semaphorin 3D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3D, Length 6,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-201ENST00000284136 DLC1Q96QB1 1528 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 TTC24A2A3L6 582 aaPredicted RBP4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 SFI1A8K8P3 1242 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 TECP42680 631 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 IKBKEQ14164 716 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 RNF43Q68DV7 783 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 PLEKHH3Q7Z736 793 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 DCAF5Q96JK2 942 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 SRPK1Q96SB4 655 aaKnown RBP4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 EVA1BQ9NVM1 165 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 NUB1Q9Y5A7 615 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 DISP2A7MBM2 1401 aa4.17□□□□□ -1.74
SEMA3D-201ENST00000284136 PLEKHH2Q8IVE3 1493 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 HMGCRP04035 888 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 LRRC41Q15345 812 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 ZNF569Q5MCW4 686 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 OTOP1Q7RTM1 612 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 GPKOWQ92917 476 aaPredicted RBP eCLIP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 MAP7D2Q96T17 732 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 HIPK3Q9H422 1215 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 NEUROD4Q9HD90 331 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 SNRKQ9NRH2 765 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 MEN1O00255 615 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 ATCAYQ86WG3 371 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 GPIHBP1Q8IV16 184 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 PNISRQ8TF01 805 aaKnown RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 SUGCTQ9HAC7 445 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 SH3BGRL2Q9UJC5 107 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 SETD5Q9C0A6 1442 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 H3BRB1 525 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 NEMP1O14524 444 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 PLSCR1O15162 318 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 WEE1P30291 646 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 DCTN1Q14203 1278 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 MCTP2Q6DN12 878 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 RALYLQ86SE5 291 aaKnown RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 FUBP3Q96I24 572 aaKnown RBP eCLIP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 SHDQ96IW2 340 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 MPHOSPH9Q99550 1183 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 SAMSN1Q9NSI8 373 aaKnown RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 LHX6Q9UPM6 363 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 MRPS17Q9Y2R5 130 aaKnown RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 ARHGAP35Q9NRY4 1499 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 KIF3CO14782 793 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 ABCB4P21439 1286 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 ALDH7A1P49419 539 aaKnown RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 RPS8P62241 208 aaKnown RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 TCEA2Q15560 299 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 ATAT1Q5SQI0 421 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 ZNF790Q6PG37 636 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 TMEM169Q96HH4 297 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 MXD3Q9BW11 206 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 BRIP1Q9BX63 1249 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 UBA5Q9GZZ9 404 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 RALYQ9UKM9 306 aaKnown RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 MAGED2Q9UNF1 606 aaPredicted RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 ZNF541Q9H0D2 1346 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 KDM5DQ9BY66 1539 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 TSPY2A6NKD2 308 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 PGK1P00558 417 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 LRG1P02750 347 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 KCNC4Q03721 635 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 SFSWAPQ12872 951 aaKnown RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 SKA1Q96BD8 255 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 RPF1Q9H9Y2 349 aaKnown RBP4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 TACC3Q9Y6A5 838 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 R4GN57 208 aa4.16□□□□□ -1.74
SEMA3D-201ENST00000284136 PABPN1LA6NDY0 278 aaKnown RBP4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 COPB2P35606 906 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 MCM2P49736 904 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 CCDC30Q5VVM6 783 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 NAA16Q6N069 864 aaPredicted RBP4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 PSRC1Q6PGN9 363 aaPredicted RBP4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 COPS6Q7L5N1 327 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 SRRM1Q8IYB3 904 aaKnown RBP4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 PCSK9Q8NBP7 692 aaKnown RBP4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 LINC00116Q8NCU8 138 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 FAM184BQ9ULE4 1060 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 ZBTB1Q9Y2K1 713 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 CALM1P0DP23 149 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 CALM2P0DP24 149 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 CALM3P0DP25 149 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 GNAT1P11488 350 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 CYP2C19P33261 490 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 SCNN1BP51168 640 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 SIM2Q14190 667 aaPredicted RBP4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 MAPKAPK5Q8IW41 473 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 COL25A1Q9BXS0 654 aaPredicted RBP4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 PTPN22Q9Y2R2 807 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 EMILIN1Q9Y6C2 1016 aa4.15□□□□□ -1.74
SEMA3D-201ENST00000284136 CLTBP09497 229 aa4.15□□□□□ -1.75
SEMA3D-201ENST00000284136 CYP7A1P22680 504 aa4.15□□□□□ -1.75
SEMA3D-201ENST00000284136 DNM2P50570 870 aa4.15□□□□□ -1.75
SEMA3D-201ENST00000284136 NOVA1P51513 510 aaKnown RBP4.15□□□□□ -1.75
SEMA3D-201ENST00000284136 USP14P54578 494 aa4.15□□□□□ -1.75
SEMA3D-201ENST00000284136 APBA1Q02410 837 aa4.15□□□□□ -1.75
SEMA3D-201ENST00000284136 C4orf17Q53FE4 359 aa4.15□□□□□ -1.75
SEMA3D-201ENST00000284136 LMBRD2Q68DH5 695 aaPredicted RBP4.15□□□□□ -1.75
SEMA3D-201ENST00000284136 MIGA1Q8NAN2 632 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms