RNA–Protein interactions for RNA: ENST00000279477.11

SIRPB1-202, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIRPB1, Length 2,207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-202ENST00000279477 ITPK1Q13572 414 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 SEC23AQ15436 765 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 METTL16Q86W50 562 aaKnown RBP13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 FCHSD1Q86WN1 690 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 MIGA1Q8NAN2 632 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 FBXO2Q9UK22 296 aaPredicted RBP13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 SRPRBQ9Y5M8 271 aaKnown RBP13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 UBASH3AP57075 661 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 PNOCQ13519 176 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 POSTNQ15063 836 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 NT5DC1Q5TFE4 455 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 NYXQ9GZU5 481 aa13.08□□□□□ -0.32
SIRPB1-202ENST00000279477 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 ARID5BQ14865 1188 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 STK11IPQ8N1F8 1099 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 MARCH10Q8NA82 808 aaPredicted RBP13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 NUP133Q8WUM0 1156 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 SMARCE1Q969G3 411 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 CLIC6Q96NY7 704 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 ZSCAN10Q96SZ4 725 aaPredicted RBP13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 RIOK1Q9BRS2 568 aaKnown RBP13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 ABCF2Q9UG63 623 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 TACC3Q9Y6A5 838 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 PRPF3O43395 683 aaKnown RBP13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 KRT2P35908 639 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 CFAP100Q494V2 611 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 LONRF3Q496Y0 759 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 PCDHA5Q9Y5H7 936 aa13.07□□□□□ -0.32
SIRPB1-202ENST00000279477 COL1A1P02452 1464 aaPredicted RBP13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 TRIM75PA6NK02 468 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 MINDY4BA8MYZ0 360 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 FGRP09769 529 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 NCBP1Q09161 790 aaKnown RBP13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 ARMCX5Q6P1M9 558 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 ZNF592Q92610 1267 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 ERO1AQ96HE7 468 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 ANKRD2Q9GZV1 360 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 INCENPQ9NQS7 918 aa13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 BAZ2AQ9UIF9 1905 aaKnown RBP13.06□□□□□ -0.32
SIRPB1-202ENST00000279477 SNAP23O00161 211 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 TOP1P11387 765 aaKnown RBP13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 GUCY1A2P33402 732 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 TOB1P50616 345 aaPredicted RBP13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 SLC10A5Q5PT55 438 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 VSTM4Q8IW00 320 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 AATFQ9NY61 560 aaKnown RBP eCLIP13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 KCNJ14Q9UNX9 436 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 GOLGA6L9A6NEM1 432 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 ORC4O43929 436 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 MDM2Q00987 491 aaPredicted RBP13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 PPP4R3BQ5MIZ7 849 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 ENOX1Q8TC92 643 aaKnown RBP13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 SDR42E1Q8WUS8 393 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 PHF20Q9BVI0 1012 aa13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 CRNKL1Q9BZJ0 848 aaKnown RBP13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 ARPP21Q9UBL0 812 aaPredicted RBP13.05□□□□□ -0.32
SIRPB1-202ENST00000279477 ERCC5P28715 1186 aaPredicted RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 GYG1P46976 350 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 ERFEQ4G0M1 354 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 NUTM2AQ8IVF1 878 aaPredicted RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 ENAHQ8N8S7 591 aaPredicted RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 TSC1Q92574 1164 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 PPP1R13BQ96KQ4 1090 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 HSD3B7Q9H2F3 369 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 ATP8A2Q9NTI2 1148 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 MAN1B1Q9UKM7 699 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 POLR2DO15514 142 aaKnown RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 ZSCAN12O43309 604 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 GTF2E1P29083 439 aaPredicted RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 SARSP49591 514 aaKnown RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 FAM193AP78312 1265 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 GABPB1Q06547 395 aaPredicted RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 MORC3Q14149 939 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 E4F1Q66K89 784 aaPredicted RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 CTCFLQ8NI51 663 aaPredicted RBP13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 MINPP1Q9UNW1 487 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 PHLPP2Q6ZVD8 1323 aa13.04□□□□□ -0.32
SIRPB1-202ENST00000279477 SLU7O95391 586 aaKnown RBP13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 TRAPPC10P48553 1259 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 FBXO33Q7Z6M2 555 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 ADGRA1Q86SQ6 560 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 PRDM10Q9NQV6 1147 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 TRMT1Q9NXH9 659 aaKnown RBP13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 TAOK2Q9UL54 1235 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 COL4A1P02462 1669 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 ARHGAP6O43182 974 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 ACTN4O43707 911 aaKnown RBP13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 ATP1A3P13637 1013 aa13.03□□□□□ -0.32
SIRPB1-202ENST00000279477 PLCD1P51178 756 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms