RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 GMLQ99445 158 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 MKNK2Q9HBH9 465 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 CD2APQ9Y5K6 639 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 FOCADQ5VW36 1801 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 CCDC69A6NI79 296 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 PLEKHA8P1O95397 391 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 F13A1P00488 732 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 NTRK3Q16288 839 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 HHIPL2Q6UWX4 724 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 SGMS1Q86VZ5 419 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 ZNF654Q8IZM8 581 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 ZNRF3Q9ULT6 936 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 PRPF40AO75400 957 aaKnown RBP13.71□□□□□ -0.21
SSRP1-201ENST00000278412 NBPF9Q3BBW0 867 aa13.71□□□□□ -0.21
SSRP1-201ENST00000278412 NBPF11Q86T75 865 aa13.71□□□□□ -0.21
SSRP1-201ENST00000278412 SHISA4Q96DD7 197 aa13.71□□□□□ -0.21
SSRP1-201ENST00000278412 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.71□□□□□ -0.21
SSRP1-201ENST00000278412 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.71□□□□□ -0.21
SSRP1-201ENST00000278412 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.21
SSRP1-201ENST00000278412 ORC4O43929 436 aa13.71□□□□□ -0.22
SSRP1-201ENST00000278412 GADD45BO75293 160 aaPredicted RBP13.71□□□□□ -0.22
SSRP1-201ENST00000278412 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.22
SSRP1-201ENST00000278412 OSBPL5Q9H0X9 879 aaPredicted RBP13.71□□□□□ -0.22
SSRP1-201ENST00000278412 SPON1Q9HCB6 807 aa13.71□□□□□ -0.22
SSRP1-201ENST00000278412 AKR1B1P15121 316 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 JAG1P78504 1218 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 IFIT1BQ5T764 474 aaKnown RBP13.7□□□□□ -0.22
SSRP1-201ENST00000278412 TFIP11Q9UBB9 837 aaKnown RBP13.7□□□□□ -0.22
SSRP1-201ENST00000278412 ORC3Q9UBD5 711 aaPredicted RBP13.7□□□□□ -0.22
SSRP1-201ENST00000278412 GJA3Q9Y6H8 435 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 WDR19Q8NEZ3 1342 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 ZNF541Q9H0D2 1346 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 SIPA1L1O43166 1804 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 CPLX1O14810 134 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 NCLP19338 710 aaKnown RBP13.7□□□□□ -0.22
SSRP1-201ENST00000278412 LIFRP42702 1097 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 PDE4BQ07343 736 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 STX8Q9UNK0 236 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 SUGT1Q9Y2Z0 365 aa13.7□□□□□ -0.22
SSRP1-201ENST00000278412 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
SSRP1-201ENST00000278412 PSME4Q14997 1843 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 FIBPO43427 364 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 GOLGA8HP0CJ92 632 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 RRP1BQ14684 758 aaKnown RBP13.69□□□□□ -0.22
SSRP1-201ENST00000278412 C16orf86Q6ZW13 317 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 SAMD7Q7Z3H4 446 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 ZSCAN29Q8IWY8 852 aaPredicted RBP13.69□□□□□ -0.22
SSRP1-201ENST00000278412 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 YBX3P16989 372 aaKnown RBP eCLIP13.69□□□□□ -0.221e-7■■■□□ 15.2
SSRP1-201ENST00000278412 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 STAG2Q8N3U4 1231 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 SLC26A6Q9BXS9 759 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 LMBRD1Q9NUN5 540 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 ROBO3Q96MS0 1386 aa13.69□□□□□ -0.22
SSRP1-201ENST00000278412 ERICH2A1L162 156 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 ADAMTS3O15072 1205 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 TSPY3P0CV98 308 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 TSPY8P0CW00 308 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 PLCG2P16885 1265 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 CEBPZQ03701 1054 aaKnown RBP13.68□□□□□ -0.22
SSRP1-201ENST00000278412 TROAPQ12815 778 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 ARHGAP27Q6ZUM4 889 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 CEP95Q96GE4 821 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 SPDYE2BA6NHP3 402 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 KIF28PB7ZC32 967 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 TRAK2O60296 914 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 SPDYE6P0CI01 402 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 SHMT1P34896 483 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 GABPAQ06546 454 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 DLK2Q6UY11 383 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 IQCA1Q86XH1 822 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 FANCBQ8NB91 859 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 VEZTQ9HBM0 779 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 SERPINA10Q9UK55 444 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 SART3Q15020 963 aaKnown RBP13.68□□□□□ -0.22
SSRP1-201ENST00000278412 RTN1Q16799 776 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 JDP2Q8WYK2 163 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 GBP4Q96PP9 640 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 SYT17Q9BSW7 474 aa13.68□□□□□ -0.22
SSRP1-201ENST00000278412 RBM27Q9P2N5 1060 aaKnown RBP13.68□□□□□ -0.22
SSRP1-201ENST00000278412 ZNF444Q8N0Y2 327 aaPredicted RBP13.67□□□□□ -0.22
SSRP1-201ENST00000278412 GPT2Q8TD30 523 aa13.67□□□□□ -0.22
SSRP1-201ENST00000278412 TMEM39BQ9GZU3 492 aa13.67□□□□□ -0.22
SSRP1-201ENST00000278412 FZD1Q9UP38 647 aa13.67□□□□□ -0.22
SSRP1-201ENST00000278412 PCNTO95613 3336 aa13.67□□□□□ -0.22
SSRP1-201ENST00000278412 H3BQV1 296 aa13.67□□□□□ -0.22
SSRP1-201ENST00000278412 GDF11O95390 407 aa13.67□□□□□ -0.22
SSRP1-201ENST00000278412 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
SSRP1-201ENST00000278412 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
SSRP1-201ENST00000278412 LRRC47Q8N1G4 583 aaKnown RBP13.67□□□□□ -0.22
SSRP1-201ENST00000278412 SERPINB13Q9UIV8 391 aa13.67□□□□□ -0.22
SSRP1-201ENST00000278412 KCNJ14Q9UNX9 436 aa13.67□□□□□ -0.22
SSRP1-201ENST00000278412 SLC3A2P08195 630 aaKnown RBP13.66□□□□□ -0.22
SSRP1-201ENST00000278412 GMPSP49915 693 aaPredicted RBP13.66□□□□□ -0.22
SSRP1-201ENST00000278412 RESTQ13127 1097 aa13.66□□□□□ -0.22
SSRP1-201ENST00000278412 PRAMEF18Q5VWM3 479 aa13.66□□□□□ -0.22
SSRP1-201ENST00000278412 CIAPIN1Q6FI81 312 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms