RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 RESTQ13127 1097 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 DTHD1Q6ZMT9 781 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 STOX1Q6ZVD7 989 aa16.27■□□□□ 0.2
TMEM47-201ENST00000275954 ZNF397Q8NF99 534 aaPredicted RBP16.27■□□□□ 0.2
TMEM47-201ENST00000275954 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.2
TMEM47-201ENST00000275954 CLRN2A0PK11 232 aa16.27■□□□□ 0.19
TMEM47-201ENST00000275954 CALML3P27482 149 aa16.27■□□□□ 0.19
TMEM47-201ENST00000275954 CACNB3P54284 484 aa16.27■□□□□ 0.19
TMEM47-201ENST00000275954 LCORLQ8N3X6 602 aa16.27■□□□□ 0.19
TMEM47-201ENST00000275954 CUTAO60888 179 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 FOXO4P98177 505 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 DPCR1Q3MIW9 517 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 EXOC1Q9NV70 894 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 NOSTRINQ8IVI9 506 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 CCDC148Q8NFR7 591 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 BLZF1Q9H2G9 400 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 CGNQ9P2M7 1197 aaKnown RBP16.26■□□□□ 0.19
TMEM47-201ENST00000275954 ARHGAP23Q9P227 1491 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 ZNF500O60304 480 aaPredicted RBP16.26■□□□□ 0.19
TMEM47-201ENST00000275954 HLA-DOAP06340 250 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 NR5A1Q13285 461 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 DIXDC1Q155Q3 683 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 GPCPD1Q9NPB8 672 aa16.26■□□□□ 0.19
TMEM47-201ENST00000275954 ERLIN1O75477 346 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 MATR3P43243 847 aaKnown RBP eCLIP16.25■□□□□ 0.19
TMEM47-201ENST00000275954 NLRP12P59046 1061 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 CCDC40Q4G0X9 1142 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 POTEAQ6S8J7 498 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 ATG9AQ7Z3C6 839 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 TTF2Q9UNY4 1162 aaKnown RBP16.25■□□□□ 0.19
TMEM47-201ENST00000275954 SLU7O95391 586 aaKnown RBP16.25■□□□□ 0.19
TMEM47-201ENST00000275954 CENPHQ9H3R5 247 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 FBXO3Q9UK99 471 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 RCOR1Q9UKL0 485 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 JAKMIP3Q5VZ66 844 aa16.25■□□□□ 0.19
TMEM47-201ENST00000275954 PSMA7O14818 248 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 COBLO75128 1261 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.24■□□□□ 0.19
TMEM47-201ENST00000275954 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 POSTNQ15063 836 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 ZMYM6O95789 1325 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 GOLGA8HP0CJ92 632 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 AMPD3Q01432 767 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 CLEC17AQ6ZS10 378 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 PCDHA5Q9Y5H7 936 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 COL15A1P39059 1388 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 MYO1BO43795 1136 aa16.24■□□□□ 0.19
TMEM47-201ENST00000275954 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.24■□□□□ 0.19
TMEM47-201ENST00000275954 AKR1B10O60218 316 aa16.23■□□□□ 0.19
TMEM47-201ENST00000275954 UBXN1Q04323 297 aa16.23■□□□□ 0.19
TMEM47-201ENST00000275954 LINC00301Q8NCQ3 95 aa16.23■□□□□ 0.19
TMEM47-201ENST00000275954 BAG1Q99933 345 aaPredicted RBP16.23■□□□□ 0.19
TMEM47-201ENST00000275954 MMRN2Q9H8L6 949 aa16.23■□□□□ 0.19
TMEM47-201ENST00000275954 C6orf50Q9HD87 102 aa16.23■□□□□ 0.19
TMEM47-201ENST00000275954 FANCLQ9NW38 375 aa16.23■□□□□ 0.19
TMEM47-201ENST00000275954 ARHGEF28Q8N1W1 1705 aaKnown RBP16.23■□□□□ 0.19
TMEM47-201ENST00000275954 CMA1P23946 247 aa16.23■□□□□ 0.19
TMEM47-201ENST00000275954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.23■□□□□ 0.19
TMEM47-201ENST00000275954 CACTINQ8WUQ7 758 aaKnown RBP16.23■□□□□ 0.19
TMEM47-201ENST00000275954 TSG101Q99816 390 aa16.23■□□□□ 0.19
TMEM47-201ENST00000275954 LUC7LQ9NQ29 371 aaKnown RBP16.23■□□□□ 0.19
TMEM47-201ENST00000275954 PUF60Q9UHX1 559 aaKnown RBP16.23■□□□□ 0.19
TMEM47-201ENST00000275954 CTNND2Q9UQB3 1225 aa16.23■□□□□ 0.19
TMEM47-201ENST00000275954 SLIT1O75093 1534 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 DDIT3P35638 169 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 KIF23Q02241 960 aaPredicted RBP16.22■□□□□ 0.19
TMEM47-201ENST00000275954 ARID5AQ03989 594 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 GRAMD1CQ8IYS0 662 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 RRP36Q96EU6 259 aaKnown RBP16.22■□□□□ 0.19
TMEM47-201ENST00000275954 TRERF1Q96PN7 1200 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 RTEL1Q9NZ71 1219 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 NARFQ9UHQ1 456 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 MYOM1P52179 1685 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 SRCAPQ6ZRS2 3230 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 NCAPD2Q15021 1401 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 ADKP55263 362 aaKnown RBP16.22■□□□□ 0.19
TMEM47-201ENST00000275954 GOLGA8FQ08AF8 430 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 GOLGA8DPQ0D2H9 430 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 ARID5BQ14865 1188 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 MYRIPQ8NFW9 859 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.19
TMEM47-201ENST00000275954 JADE2Q9NQC1 790 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 RBM28Q9NW13 759 aaKnown RBP16.22■□□□□ 0.19
TMEM47-201ENST00000275954 RMND1Q9NWS8 449 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 TCP10L2B9ZVM9 353 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 PDE6BP35913 854 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 TBC1D10CQ8IV04 446 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 IGSF22Q8N9C0 903 aa16.22■□□□□ 0.19
TMEM47-201ENST00000275954 RABL6Q3YEC7 729 aaPredicted RBP16.21■□□□□ 0.19
TMEM47-201ENST00000275954 PARP1P09874 1014 aaKnown RBP16.21■□□□□ 0.19
TMEM47-201ENST00000275954 CDC25AP30304 524 aa16.21■□□□□ 0.19
TMEM47-201ENST00000275954 TXKP42681 527 aa16.21■□□□□ 0.19
TMEM47-201ENST00000275954 LONRF3Q496Y0 759 aa16.21■□□□□ 0.19
TMEM47-201ENST00000275954 STRBPQ96SI9 672 aaKnown RBP16.21■□□□□ 0.19
TMEM47-201ENST00000275954 ZSCAN10Q96SZ4 725 aaPredicted RBP16.21■□□□□ 0.19
TMEM47-201ENST00000275954 GUCA1BQ9UMX6 200 aa16.21■□□□□ 0.19
TMEM47-201ENST00000275954 CCDC175P0C221 793 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms