RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 CCDC102BQ68D86 513 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 TRAPPC11Q7Z392 1133 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 RPAINQ86UA6 219 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 CCDC148Q8NFR7 591 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 MIEF2Q96C03 454 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 CABS1Q96KC9 395 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 TUBB2BQ9BVA1 445 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 A1CFQ9NQ94 594 aaKnown RBP10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 BABAM1Q9NWV8 329 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 FPGT-TNNI3KV9GXZ4 949 aa10.4□□□□□ -0.75
HMGCLL1-201ENST00000274901 KDM3BQ7LBC6 1761 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 GOLGA8BA8MQT2 603 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 ATP1A1P05023 1023 aaKnown RBP10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 ELF1P32519 619 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 PPFIA1Q13136 1202 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 MORC3Q14149 939 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 KSR2Q6VAB6 950 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 BRINP3Q76B58 766 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 VPS37DQ86XT2 251 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 POTEDQ86YR6 584 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 CAPZA3Q96KX2 299 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 SH3GL2Q99962 352 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 SLF1Q9BQI6 1058 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 FBXO3Q9UK99 471 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 SH3TC1Q8TE82 1336 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 KLF18A0A0U1RQI7 1052 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 PDE2AO00408 941 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 STX17P56962 302 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 HAND2P61296 217 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 MRPS25P82663 173 aaKnown RBP10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 ACTN3Q08043 901 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 DDR1Q08345 913 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 PDCLQ13371 301 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 ZNF530Q6P9A1 599 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 MPRIPQ6WCQ1 1025 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 EGFL6Q8IUX8 553 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 STK11IPQ8N1F8 1099 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 N4BP2L2Q92802 583 aaPredicted RBP10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 ARL8AQ96BM9 186 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 HAUS7Q99871 368 aa10.39□□□□□ -0.75
HMGCLL1-201ENST00000274901 SLIT3O75094 1523 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 NWD2Q9ULI1 1742 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 FOXP2O15409 715 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 PPP6R2O75170 966 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 FSBPO95073 299 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 IGKV5-2P06315 115 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 CD44P16070 742 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 FECHP22830 423 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 USP8P40818 1118 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 SARSP49591 514 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 ANTXR2P58335 489 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 POSTNQ15063 836 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 EZH2Q15910 746 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 TTMPQ5BVD1 217 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 PPFIBP1Q86W92 1011 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 NUTM2AQ8IVF1 878 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 NAA15Q9BXJ9 866 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 NLRP2Q9NX02 1062 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 ADD3Q9UEY8 706 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 SERTAD1Q9UHV2 236 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 TTF2Q9UNY4 1162 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 UTYO14607 1347 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 C4AP0C0L4 1744 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 C4BP0C0L5 1744 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 DCCP43146 1447 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 GOLGA6BA6NDN3 693 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 ZNF185O15231 689 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 TUBB4BP68371 445 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 PREPLQ4J6C6 727 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 CCNI2Q6ZMN8 369 aaPredicted RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 HDAC7Q8WUI4 952 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 STAG1Q8WVM7 1258 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 SGSM3Q96HU1 749 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 CRACR2AQ9BSW2 395 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 SLC24A3Q9HC58 644 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 SLAIN2Q9P270 581 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 HOOK1Q9UJC3 728 aaKnown RBP10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 DENND2AQ9ULE3 1009 aa10.38□□□□□ -0.75
HMGCLL1-201ENST00000274901 MAST3O60307 1309 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 M0R2C6 588 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 GOLIM4O00461 696 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 TUBBP07437 444 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 RXRAP19793 462 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 CASP1P29466 404 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 AIMP1Q12904 312 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 NT5DC1Q5TFE4 455 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 AMOTL1Q8IY63 956 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 KIRREL3Q8IZU9 778 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 KBTBD3Q8NAB2 608 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 GIMAP7Q8NHV1 300 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 AENQ8WTP8 325 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 CHP1Q99653 195 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 DSCC1Q9BVC3 393 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 GUCA1BQ9UMX6 200 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 ECM29Q5VYK3 1845 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 XIRP1Q702N8 1843 aaKnown RBP10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 RFX7Q2KHR2 1363 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 ZMYM6O95789 1325 aa10.37□□□□□ -0.75
HMGCLL1-201ENST00000274901 SHTN1A0MZ66 631 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms