RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 SOS2Q07890 1332 aaPredicted RBP16.54■□□□□ 0.24
CNOT9-201ENST00000273064 INF2Q27J81 1249 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 ERCC6LQ2NKX8 1250 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 CELF1Q92879 486 aaKnown RBP16.54■□□□□ 0.24
CNOT9-201ENST00000273064 EPSTI1Q96J88 318 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 RTEL1Q9NZ71 1219 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 PTGDRQ13258 359 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 CCDC144BQ3MJ40 725 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 RBM26Q5T8P6 1007 aaKnown RBP16.54■□□□□ 0.24
CNOT9-201ENST00000273064 FOXN1O15353 648 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 CCNT1O60563 726 aaKnown RBP16.54■□□□□ 0.24
CNOT9-201ENST00000273064 CMA1P23946 247 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 DOK7Q18PE1 504 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 ZSCAN10Q96SZ4 725 aaPredicted RBP16.54■□□□□ 0.24
CNOT9-201ENST00000273064 PKD2L1Q9P0L9 805 aa16.54■□□□□ 0.24
CNOT9-201ENST00000273064 RTL9Q8NET4 1388 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 SLC39A14Q15043 492 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
CNOT9-201ENST00000273064 CSRNP2Q9H175 543 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 KIF28PB7ZC32 967 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 OXER1Q8TDS5 423 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 PLEKHA4Q9H4M7 779 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 PXDNQ92626 1479 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 PSMA7O14818 248 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 PLEKHA8P1O95397 391 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 CYP19A1P11511 503 aaPredicted RBP16.53■□□□□ 0.24
CNOT9-201ENST00000273064 MFSD14BQ5SR56 506 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
CNOT9-201ENST00000273064 ZNF397Q8NF99 534 aaPredicted RBP16.52■□□□□ 0.24
CNOT9-201ENST00000273064 UBE2Q2Q8WVN8 375 aa16.52■□□□□ 0.24
CNOT9-201ENST00000273064 FRMPD2Q68DX3 1309 aaPredicted RBP16.52■□□□□ 0.24
CNOT9-201ENST00000273064 CALM1P0DP23 149 aa16.52■□□□□ 0.24
CNOT9-201ENST00000273064 CALM2P0DP24 149 aa16.52■□□□□ 0.24
CNOT9-201ENST00000273064 CALM3P0DP25 149 aa16.52■□□□□ 0.24
CNOT9-201ENST00000273064 ARID4AP29374 1257 aaPredicted RBP16.52■□□□□ 0.24
CNOT9-201ENST00000273064 PNMA1Q8ND90 353 aa16.52■□□□□ 0.24
CNOT9-201ENST00000273064 PDLIM2Q96JY6 352 aa16.52■□□□□ 0.24
CNOT9-201ENST00000273064 GDAP1L1Q96MZ0 367 aa16.52■□□□□ 0.24
CNOT9-201ENST00000273064 SH2B2O14492 632 aaPredicted RBP16.52■□□□□ 0.23
CNOT9-201ENST00000273064 USP8P40818 1118 aa16.52■□□□□ 0.23
CNOT9-201ENST00000273064 PLS1Q14651 629 aa16.52■□□□□ 0.23
CNOT9-201ENST00000273064 FCHSD1Q86WN1 690 aa16.52■□□□□ 0.23
CNOT9-201ENST00000273064 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.23
CNOT9-201ENST00000273064 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.23
CNOT9-201ENST00000273064 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.52■□□□□ 0.23
CNOT9-201ENST00000273064 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.23
CNOT9-201ENST00000273064 DIP2AQ14689 1571 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 KRBA2Q6ZNG9 492 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 TMOD2Q9NZR1 351 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 USP21Q9UK80 565 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 CCDC175P0C221 793 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 RNASE9P60153 205 aaKnown RBP16.51■□□□□ 0.23
CNOT9-201ENST00000273064 FAM196AQ6ZSG2 479 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 CALML3P27482 149 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 FEZ1Q99689 392 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 ANKRD2Q9GZV1 360 aa16.51■□□□□ 0.23
CNOT9-201ENST00000273064 TDRD7Q8NHU6 1098 aaKnown RBP16.5■□□□□ 0.23
CNOT9-201ENST00000273064 SLF1Q9BQI6 1058 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 RAB34Q9BZG1 259 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 VEZTQ9HBM0 779 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 SAMSN1Q9NSI8 373 aaKnown RBP16.5■□□□□ 0.23
CNOT9-201ENST00000273064 MACROD2A1Z1Q3 448 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 USP17L3A6NCW0 530 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 USP17L4A6NCW7 530 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 HLA-DOAP06340 250 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 PARP1P09874 1014 aaKnown RBP16.5■□□□□ 0.23
CNOT9-201ENST00000273064 KRT9P35527 623 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 USP17L1Q7RTZ2 530 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 SYMPKQ92797 1274 aaKnown RBP16.5■□□□□ 0.23
CNOT9-201ENST00000273064 RRP36Q96EU6 259 aaKnown RBP16.5■□□□□ 0.23
CNOT9-201ENST00000273064 SAMM50Q9Y512 469 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 FAM205CA6NFA0 338 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 NOP2P46087 812 aaKnown RBP16.5■□□□□ 0.23
CNOT9-201ENST00000273064 EVCP57679 992 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 PDE4DQ08499 809 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 ST3GAL1Q11201 340 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 C6orf50Q9HD87 102 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 ERLIN1O75477 346 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 ECM2O94769 699 aaPredicted RBP16.5■□□□□ 0.23
CNOT9-201ENST00000273064 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 GSTO1P78417 241 aa16.5■□□□□ 0.23
CNOT9-201ENST00000273064 WTIPA6NIX2 430 aaPredicted RBP16.49■□□□□ 0.23
CNOT9-201ENST00000273064 USP27XA6NNY8 438 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 TMEM87AQ8NBN3 555 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 CCDC148Q8NFR7 591 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 TECPR2O15040 1411 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 SHPRHQ149N8 1683 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 SYNRGQ9UMZ2 1314 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 AKR1B15C9JRZ8 316 aaPredicted RBP16.49■□□□□ 0.23
CNOT9-201ENST00000273064 GNAQP50148 359 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 CHMP4BP1P59074 171 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 TBC1D8BQ0IIM8 1120 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 PTPROQ16827 1216 aa16.49■□□□□ 0.23
CNOT9-201ENST00000273064 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms