RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 RPS6KA1Q15418 735 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 BEND3Q5T5X7 828 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 PLIN2Q99541 437 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 LMBRD1Q9NUN5 540 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 FRMD4BQ9Y2L6 1034 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 ANKRD36BQ8N2N9 1353 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 APOEP02649 317 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 NME9Q86XW9 330 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 PDCD7Q8N8D1 485 aaKnown RBP11.72□□□□□ -0.53
OTOF-201ENST00000272371 PDZD8Q8NEN9 1154 aa11.72□□□□□ -0.53
OTOF-201ENST00000272371 RPL13P26373 211 aaKnown RBP11.71□□□□□ -0.53
OTOF-201ENST00000272371 GNAQP50148 359 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 PLEKHA4Q9H4M7 779 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.53
OTOF-201ENST00000272371 CALM1P0DP23 149 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 CALM2P0DP24 149 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 CALM3P0DP25 149 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 PAK1Q13153 545 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 CHST3Q7LGC8 479 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 ANKRD44Q8N8A2 993 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 PPP4R1Q8TF05 950 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 HAUS1Q96CS2 278 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 ZKSCAN3Q9BRR0 538 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 GADD45BO75293 160 aaPredicted RBP11.71□□□□□ -0.53
OTOF-201ENST00000272371 CA8P35219 290 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 TAF11Q15544 211 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 ARHGAP45Q92619 1136 aa11.71□□□□□ -0.53
OTOF-201ENST00000272371 CRNKL1Q9BZJ0 848 aaKnown RBP11.71□□□□□ -0.53
OTOF-201ENST00000272371 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.71□□□□□ -0.54
OTOF-201ENST00000272371 RSPH3Q86UC2 560 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 HOMEZQ8IX15 550 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 EIF2AQ9BY44 585 aaKnown RBP11.71□□□□□ -0.54
OTOF-201ENST00000272371 MBIPQ9NS73 344 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 ATP8B1O43520 1251 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 P3H4Q92791 437 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 HAUS8Q9BT25 410 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 VWA3AA6NCI4 1184 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 TRAF5O00463 557 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 GIPC1O14908 333 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 CCDC197Q8NCU1 140 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 KIFC2Q96AC6 838 aa11.71□□□□□ -0.54
OTOF-201ENST00000272371 BAG3O95817 575 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 CNNM4Q6P4Q7 775 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 C6orf50Q9HD87 102 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 SV2BQ7L1I2 683 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 MLKLQ8NB16 471 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 ABT1Q9ULW3 272 aaKnown RBP11.7□□□□□ -0.54
OTOF-201ENST00000272371 STX8Q9UNK0 236 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 KRT9P35527 623 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 SRGAP1Q7Z6B7 1085 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 MEIS3Q99687 375 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 SLC24A3Q9HC58 644 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 SLC4A4Q9Y6R1 1079 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 CCDC93Q567U6 631 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 CENPKQ9BS16 269 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 SCINQ9Y6U3 715 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 VPS37BQ9H9H4 285 aa11.7□□□□□ -0.54
OTOF-201ENST00000272371 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 CREB3O43889 395 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 SUN1O94901 812 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 MAGEA1P43355 309 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 PDE4DQ08499 809 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 PEX26Q7Z412 305 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 ILDR1Q86SU0 546 aaPredicted RBP11.69□□□□□ -0.54
OTOF-201ENST00000272371 LRRC8AQ8IWT6 810 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 TCP11Q8WWU5 503 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 SPDL1Q96EA4 605 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 BTG4Q9NY30 223 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 KCNH3Q9ULD8 1083 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 EVI5O60447 810 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 ATP2A3Q93084 1043 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 SLAIN2Q9P270 581 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
OTOF-201ENST00000272371 UHRF1BP1LA0JNW5 1464 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 POLR2DO15514 142 aaKnown RBP11.69□□□□□ -0.54
OTOF-201ENST00000272371 CCDC92Q53HC0 331 aaPredicted RBP11.69□□□□□ -0.54
OTOF-201ENST00000272371 RBM26Q5T8P6 1007 aaKnown RBP11.69□□□□□ -0.54
OTOF-201ENST00000272371 ICE2Q659A1 982 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 CSGALNACT2Q8N6G5 542 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 CHD1O14646 1710 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 SEC31AO94979 1220 aaKnown RBP11.69□□□□□ -0.54
OTOF-201ENST00000272371 UQCRFS1P1P0C7P4 283 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 ARHGEF6Q15052 776 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 LONRF2Q1L5Z9 754 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 ANKRD20A4Q4UJ75 823 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 ANKRD20A8PQ5CZ79 823 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 ANKRD20A2Q5SQ80 823 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 AKNAD1Q5T1N1 836 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 LIN9Q5TKA1 542 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 ANKRD20A1Q5TYW2 823 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 YY1AP1Q9H869 796 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 CABP5Q9NP86 173 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 ADKP55263 362 aaKnown RBP11.69□□□□□ -0.54
OTOF-201ENST00000272371 APBA1Q02410 837 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 RAD51AP2Q09MP3 1159 aa11.69□□□□□ -0.54
OTOF-201ENST00000272371 DHX32Q7L7V1 743 aaKnown RBP11.69□□□□□ -0.54
OTOF-201ENST00000272371 XPO4Q9C0E2 1151 aaKnown RBP11.69□□□□□ -0.54
OTOF-201ENST00000272371 ATF5Q9Y2D1 282 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms