RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CCL5P13501 91 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 GJA8P48165 433 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 MVPQ14764 893 aaKnown RBP11.07□□□□□ -0.64
TPM3-201ENST00000271850 GADL1Q6ZQY3 521 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 ERICH6Q7L0X2 663 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 ZSCAN29Q8IWY8 852 aaPredicted RBP11.07□□□□□ -0.64
TPM3-201ENST00000271850 GCC1Q96CN9 775 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 NEUROD6Q96NK8 337 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 OSBPL5Q9H0X9 879 aaPredicted RBP11.07□□□□□ -0.64
TPM3-201ENST00000271850 UNC93B1Q9H1C4 597 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 MAST2Q6P0Q8 1798 aa11.07□□□□□ -0.64
TPM3-201ENST00000271850 PEX10O60683 326 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 GNAI2P04899 355 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 RLBP1P12271 317 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 ELNP15502 786 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 RAET1EQ8TD07 263 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 SH3RF3Q8TEJ3 882 aaPredicted RBP11.06□□□□□ -0.64
TPM3-201ENST00000271850 DBNDD2Q9BQY9 259 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 PRO3102Q9H379 93 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 C1orf115Q9H7X2 142 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 PICK1Q9NRD5 415 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 TLR7Q9NYK1 1049 aaKnown RBP11.06□□□□□ -0.64
TPM3-201ENST00000271850 AGTPBP1Q9UPW5 1226 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 AKAP2Q9Y2D5 859 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 SLC45A1Q9Y2W3 748 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 PLXNB2O15031 1838 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 FOCADQ5VW36 1801 aa11.06□□□□□ -0.64
TPM3-201ENST00000271850 CYP2E1P05181 493 aaPredicted RBP11.05□□□□□ -0.64
TPM3-201ENST00000271850 GJB1P08034 283 aa11.05□□□□□ -0.64
TPM3-201ENST00000271850 FLT3LGP49771 235 aa11.05□□□□□ -0.64
TPM3-201ENST00000271850 FCGRTP55899 365 aa11.05□□□□□ -0.64
TPM3-201ENST00000271850 SPTY2D1Q68D10 685 aaPredicted RBP11.05□□□□□ -0.64
TPM3-201ENST00000271850 POTEEQ6S8J3 1075 aa11.05□□□□□ -0.64
TPM3-201ENST00000271850 FASTKD5Q7L8L6 764 aaKnown RBP11.05□□□□□ -0.64
TPM3-201ENST00000271850 ANKRD13CQ8N6S4 541 aa11.05□□□□□ -0.64
TPM3-201ENST00000271850 FRAT1Q92837 279 aaPredicted RBP11.05□□□□□ -0.64
TPM3-201ENST00000271850 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
TPM3-201ENST00000271850 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
TPM3-201ENST00000271850 HCSTQ9UBK5 93 aa11.05□□□□□ -0.64
TPM3-201ENST00000271850 ALPK3Q96L96 1907 aa11.05□□□□□ -0.64
TPM3-201ENST00000271850 INHAP05111 366 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 NUDT7P0C024 238 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 CAP2P40123 477 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 SPP2Q13103 211 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 TNNI3KQ59H18 835 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 METTL16Q86W50 562 aaKnown RBP11.04□□□□□ -0.64
TPM3-201ENST00000271850 SSH3Q8TE77 659 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 U2AF1L4Q8WU68 220 aaKnown RBP11.04□□□□□ -0.64
TPM3-201ENST00000271850 RNF208Q9H0X6 261 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.04□□□□□ -0.64
TPM3-201ENST00000271850 PIH1D3Q9NQM4 214 aaKnown RBP11.04□□□□□ -0.64
TPM3-201ENST00000271850 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 HDAC5Q9UQL6 1122 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 FPGT-TNNI3KV9GXZ4 949 aa11.04□□□□□ -0.64
TPM3-201ENST00000271850 ADCY3O60266 1144 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 HOXD10P28358 340 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 HMGCS2P54868 508 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 TRIM32Q13049 653 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 IRF5Q13568 498 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 SH3D19Q5HYK7 790 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 SLF2Q8IX21 1173 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 TEX11Q8IYF3 940 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 PAK6Q9NQU5 681 aaPredicted RBP11.03□□□□□ -0.64
TPM3-201ENST00000271850 AATFQ9NY61 560 aaKnown RBP eCLIP11.03□□□□□ -0.64
TPM3-201ENST00000271850 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
TPM3-201ENST00000271850 DBNLQ9UJU6 430 aaKnown RBP11.03□□□□□ -0.64
TPM3-201ENST00000271850 GJD2Q9UKL4 321 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 NDUFB9Q9Y6M9 179 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 FLT1P17948 1338 aa11.03□□□□□ -0.64
TPM3-201ENST00000271850 SGPL1O95470 568 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 ZAP70P43403 619 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 PPP4CP60510 307 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 DYNLL1P63167 89 aaKnown RBP11.02□□□□□ -0.65
TPM3-201ENST00000271850 ATP8B2P98198 1209 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 G3BP1Q13283 466 aaKnown RBP eCLIP11.02□□□□□ -0.651e-6■■■□□ 15.4
TPM3-201ENST00000271850 FAM110CQ1W6H9 321 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 MAPKAPK5Q8IW41 473 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 PROCA1Q8NCQ7 364 aaPredicted RBP11.02□□□□□ -0.65
TPM3-201ENST00000271850 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 PXYLP1Q8TE99 480 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 DIS3LQ8TF46 1054 aaKnown RBP11.02□□□□□ -0.65
TPM3-201ENST00000271850 ASCC2Q9H1I8 757 aaPredicted RBP11.02□□□□□ -0.65
TPM3-201ENST00000271850 TXNRD2Q9NNW7 524 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 GPR108Q9NPR9 543 aa11.02□□□□□ -0.65
TPM3-201ENST00000271850 DDX60LQ5H9U9 1706 aaKnown RBP11.01□□□□□ -0.65
TPM3-201ENST00000271850 COL6A3P12111 3177 aa11.01□□□□□ -0.65
TPM3-201ENST00000271850 TNPO2O14787 897 aaKnown RBP11.01□□□□□ -0.65
TPM3-201ENST00000271850 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
TPM3-201ENST00000271850 MAP4K4O95819 1239 aaPredicted RBP11.01□□□□□ -0.65
TPM3-201ENST00000271850 UQCRFS1P1P0C7P4 283 aa11.01□□□□□ -0.65
TPM3-201ENST00000271850 GSTO1P78417 241 aa11.01□□□□□ -0.65
TPM3-201ENST00000271850 SMCR8Q8TEV9 937 aaPredicted RBP11.01□□□□□ -0.65
TPM3-201ENST00000271850 TGFBRAP1Q8WUH2 860 aa11.01□□□□□ -0.65
TPM3-201ENST00000271850 EAF2Q96CJ1 260 aaPredicted RBP11.01□□□□□ -0.65
TPM3-201ENST00000271850 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
TPM3-201ENST00000271850 LRP2BPQ9P2M1 347 aa11.01□□□□□ -0.65
TPM3-201ENST00000271850 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
TPM3-201ENST00000271850 C2orf72A6NCS6 295 aa11□□□□□ -0.65
TPM3-201ENST00000271850 USP17L5A8MUK1 530 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms