RNA–Protein interactions for RNA: ENST00000266742.8

NEDD1-201, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEDD1, Length 4,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-201ENST00000266742 PPFIBP1Q86W92 1011 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 AATFQ9NY61 560 aaKnown RBP eCLIP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 PCDHB6Q9Y5E3 794 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 MORC2Q9Y6X9 1032 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 TOGARAM1Q9Y4F4 1720 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 AKAP11Q9UKA4 1901 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 C4AP0C0L4 1744 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 SHANK3Q9BYB0 1731 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 URI1O94763 535 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 TOB1P50616 345 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 PLCD1P51178 756 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 GABPB1Q06547 395 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 NR5A1Q13285 461 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 BMS1Q14692 1282 aaKnown RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 BRIP1Q9BX63 1249 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 DISP2A7MBM2 1401 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 SNAP23O00161 211 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 MDM2Q00987 491 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 MORC3Q14149 939 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 INTS5Q6P9B9 1019 aaKnown RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 FOXP4Q8IVH2 680 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 SDR42E1Q8WUS8 393 aa9.36□□□□□ -0.91
NEDD1-201ENST00000266742 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 THRAP3Q9Y2W1 955 aaKnown RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 V9GYY5 206 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-201ENST00000266742 DDAH1O94760 285 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 CAMTA2O94983 1202 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 CASQ1P31415 396 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 NAA30Q147X3 362 aaPredicted RBP9.35□□□□□ -0.91
NEDD1-201ENST00000266742 TMED8Q6PL24 325 aaPredicted RBP9.35□□□□□ -0.91
NEDD1-201ENST00000266742 CLEC4GQ6UXB4 293 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 CMTR1Q8N1G2 835 aaKnown RBP9.35□□□□□ -0.91
NEDD1-201ENST00000266742 DPF2Q92785 391 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 DHX58Q96C10 678 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 CSRNP2Q9H175 543 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 IQSEC3Q9UPP2 1182 aaPredicted RBP9.35□□□□□ -0.91
NEDD1-201ENST00000266742 SEMA3EO15041 775 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 NPHP1O15259 732 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 SLFN14P0C7P3 912 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 ZSCAN20P17040 1043 aaPredicted RBP9.35□□□□□ -0.91
NEDD1-201ENST00000266742 SARSP49591 514 aaKnown RBP9.35□□□□□ -0.91
NEDD1-201ENST00000266742 NKX2-3Q8TAU0 364 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 HSD3B7Q9H2F3 369 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 TMX1Q9H3N1 280 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 V9GY48 417 aaPredicted RBP9.35□□□□□ -0.91
NEDD1-201ENST00000266742 MYH3P11055 1940 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 KIF20AO95235 890 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 NTSR2O95665 410 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 TXLNAP40222 546 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 GSDMAQ96QA5 445 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 CRNKL1Q9BZJ0 848 aaKnown RBP9.35□□□□□ -0.91
NEDD1-201ENST00000266742 PPP2R2CQ9Y2T4 447 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 KAT6BQ8WYB5 2073 aa9.35□□□□□ -0.91
NEDD1-201ENST00000266742 SPATA1Q5VX52 437 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 NAA15Q9BXJ9 866 aaKnown RBP9.34□□□□□ -0.91
NEDD1-201ENST00000266742 VPS54Q9P1Q0 977 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 UBE2Q2LH0YL09 131 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 KIF5BP33176 963 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 GNG11P61952 73 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 PDE4BQ07343 736 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 SEC23AQ15436 765 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 IQUBQ8NA54 791 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 BSDC1Q9NW68 430 aaPredicted RBP9.34□□□□□ -0.91
NEDD1-201ENST00000266742 ANKRD36CQ5JPF3 1778 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 AKR1B15C9JRZ8 316 aaPredicted RBP9.34□□□□□ -0.91
NEDD1-201ENST00000266742 FOXN1O15353 648 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 GYG1P46976 350 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 TRAPPC10P48553 1259 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 NT5C2P49902 561 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 NLRP5P59047 1200 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 ERCC6LQ2NKX8 1250 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 HSP90AA4PQ58FG1 418 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 TMCO3Q6UWJ1 677 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 ZNF771Q7L3S4 317 aaPredicted RBP9.34□□□□□ -0.91
NEDD1-201ENST00000266742 ENAHQ8N8S7 591 aaPredicted RBP9.34□□□□□ -0.91
NEDD1-201ENST00000266742 PHF20Q9BVI0 1012 aa9.34□□□□□ -0.91
NEDD1-201ENST00000266742 EFCAB8A8MWE9 144 aa9.34□□□□□ -0.92
NEDD1-201ENST00000266742 ACTN4O43707 911 aaKnown RBP9.34□□□□□ -0.92
NEDD1-201ENST00000266742 CCDC175P0C221 793 aa9.34□□□□□ -0.92
NEDD1-201ENST00000266742 AFMP43652 599 aa9.34□□□□□ -0.92
NEDD1-201ENST00000266742 ARHGAP29Q52LW3 1261 aa9.34□□□□□ -0.92
NEDD1-201ENST00000266742 TTC38Q5R3I4 469 aa9.34□□□□□ -0.92
NEDD1-201ENST00000266742 FBXO38Q6PIJ6 1188 aa9.34□□□□□ -0.92
NEDD1-201ENST00000266742 AMOTL1Q8IY63 956 aa9.34□□□□□ -0.92
NEDD1-201ENST00000266742 ACSBG1Q96GR2 724 aa9.34□□□□□ -0.92
NEDD1-201ENST00000266742 ZNF804BA4D1E1 1349 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 LRP5O75197 1615 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 TMEM232C9JQI7 657 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 ZNF18P17022 549 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 CALML3P27482 149 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 SPAG1Q07617 926 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 CCDC93Q567U6 631 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 FAM177A1Q8N128 213 aaPredicted RBP9.33□□□□□ -0.92
NEDD1-201ENST00000266742 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 RMND1Q9NWS8 449 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 ABCA3Q99758 1704 aa9.33□□□□□ -0.92
NEDD1-201ENST00000266742 SF3B3Q15393 1217 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms