RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PPP2R5BQ15173 497 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 STYK1Q6J9G0 422 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 GPCPD1Q9NPB8 672 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 FAM13BQ9NYF5 915 aa10.74□□□□□ -0.69
SSR3-201ENST00000265044 BAZ2BQ9UIF8 2168 aaKnown RBP10.73□□□□□ -0.69
SSR3-201ENST00000265044 TULP1O00294 542 aaPredicted RBP10.73□□□□□ -0.69
SSR3-201ENST00000265044 PLCD1P51178 756 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 PDILTQ8N807 584 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 KCNG4Q8TDN1 519 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 PODXL2Q9NZ53 605 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 HOOK1Q9UJC3 728 aaKnown RBP10.73□□□□□ -0.69
SSR3-201ENST00000265044 CEP131Q9UPN4 1083 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 BTBD18B2RXH4 712 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 C12orf60Q5U649 245 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 CAMKK2Q96RR4 588 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 TDRD3Q9H7E2 651 aaKnown RBP10.73□□□□□ -0.69
SSR3-201ENST00000265044 DDX19AQ9NUU7 478 aaKnown RBP10.73□□□□□ -0.69
SSR3-201ENST00000265044 ST3GAL1Q11201 340 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 LRRC47Q8N1G4 583 aaKnown RBP10.73□□□□□ -0.69
SSR3-201ENST00000265044 SLC16A10Q8TF71 515 aa10.73□□□□□ -0.69
SSR3-201ENST00000265044 WDR19Q8NEZ3 1342 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 FAM196BA6NMK8 535 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 FOXP2O15409 715 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 IL1R1P14778 569 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 IFNAR1P17181 557 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 MSNP26038 577 aaKnown RBP10.72□□□□□ -0.69
SSR3-201ENST00000265044 NAPAP54920 295 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 TMED8Q6PL24 325 aaPredicted RBP10.72□□□□□ -0.69
SSR3-201ENST00000265044 SGMS1Q86VZ5 419 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 FEZ1Q99689 392 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 PAPPAQ13219 1627 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 TJP1Q07157 1748 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 A0A1B0GVL5 298 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 CTDNEP1O95476 244 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 KRT2P35908 639 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 LRSAM1Q6UWE0 723 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 SMARCC2Q8TAQ2 1214 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 KCNQ5Q9NR82 932 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 TPM4P67936 248 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 ANO1Q5XXA6 986 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 IL17RAQ96F46 866 aa10.72□□□□□ -0.69
SSR3-201ENST00000265044 PLEKHA8P1O95397 391 aa10.71□□□□□ -0.69
SSR3-201ENST00000265044 XRCC6P12956 609 aaKnown RBP eCLIP10.71□□□□□ -0.69
SSR3-201ENST00000265044 MRPS27Q92552 414 aaKnown RBP10.71□□□□□ -0.69
SSR3-201ENST00000265044 RRP36Q96EU6 259 aaKnown RBP10.71□□□□□ -0.69
SSR3-201ENST00000265044 RGS17Q9UGC6 210 aaPredicted RBP10.71□□□□□ -0.69
SSR3-201ENST00000265044 ZBTB12Q9Y330 459 aaPredicted RBP10.71□□□□□ -0.69
SSR3-201ENST00000265044 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
SSR3-201ENST00000265044 KLRF2D3W0D1 207 aa10.71□□□□□ -0.69
SSR3-201ENST00000265044 CFAP100Q494V2 611 aa10.71□□□□□ -0.69
SSR3-201ENST00000265044 STRIP1Q5VSL9 837 aa10.71□□□□□ -0.69
SSR3-201ENST00000265044 UBA5Q9GZZ9 404 aa10.71□□□□□ -0.69
SSR3-201ENST00000265044 NBPF3Q9H094 633 aa10.71□□□□□ -0.69
SSR3-201ENST00000265044 TAOK3Q9H2K8 898 aa10.71□□□□□ -0.69
SSR3-201ENST00000265044 NUP188Q5SRE5 1749 aa10.71□□□□□ -0.7
SSR3-201ENST00000265044 FLT1P17948 1338 aa10.71□□□□□ -0.7
SSR3-201ENST00000265044 TRIM75PA6NK02 468 aa10.71□□□□□ -0.7
SSR3-201ENST00000265044 DDAH1O94760 285 aa10.71□□□□□ -0.7
SSR3-201ENST00000265044 RESTQ13127 1097 aa10.71□□□□□ -0.7
SSR3-201ENST00000265044 CERKLQ49MI3 558 aaPredicted RBP10.71□□□□□ -0.7
SSR3-201ENST00000265044 CCDC12Q8WUD4 166 aaPredicted RBP10.71□□□□□ -0.7
SSR3-201ENST00000265044 CSRNP1Q96S65 589 aa10.71□□□□□ -0.7
SSR3-201ENST00000265044 HPS5Q9UPZ3 1129 aa10.71□□□□□ -0.7
SSR3-201ENST00000265044 FRMPD2Q68DX3 1309 aaPredicted RBP10.7□□□□□ -0.7
SSR3-201ENST00000265044 BIN1O00499 593 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 FMNL1O95466 1100 aaPredicted RBP10.7□□□□□ -0.7
SSR3-201ENST00000265044 LIG1P18858 919 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 TXLNAP40222 546 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 DNTTIP2Q5QJE6 756 aaKnown RBP10.7□□□□□ -0.7
SSR3-201ENST00000265044 ISM2Q6H9L7 571 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 CCDC148Q8NFR7 591 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 PPP4CP60510 307 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 ZYXQ15942 572 aaKnown RBP10.7□□□□□ -0.7
SSR3-201ENST00000265044 SBK1Q52WX2 424 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 ATL3Q6DD88 541 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 USP17L2Q6R6M4 530 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 ARHGAP27Q6ZUM4 889 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 GPKOWQ92917 476 aaPredicted RBP eCLIP10.7□□□□□ -0.73e-6■■□□□ 13.5
SSR3-201ENST00000265044 RTFDC1Q9BY42 306 aaPredicted RBP10.7□□□□□ -0.7
SSR3-201ENST00000265044 PDS5AQ29RF7 1337 aaKnown RBP10.7□□□□□ -0.7
SSR3-201ENST00000265044 C4BP0C0L5 1744 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 ORC4O43929 436 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 FDPSP14324 419 aaKnown RBP10.7□□□□□ -0.7
SSR3-201ENST00000265044 CALML3P27482 149 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 EVX2Q03828 476 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 NR5A1Q13285 461 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 ZNF174Q15697 407 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 SPECC1Q5M775 1068 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 CLEC17AQ6ZS10 378 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 PIK3AP1Q6ZUJ8 805 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 DGKHQ86XP1 1220 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 RNF26Q9BY78 433 aaPredicted RBP10.7□□□□□ -0.7
SSR3-201ENST00000265044 AGXT2Q9BYV1 514 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 CPVLQ9H3G5 476 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 SUGT1Q9Y2Z0 365 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 CLIC4Q9Y696 253 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 MYH3P11055 1940 aa10.7□□□□□ -0.7
SSR3-201ENST00000265044 N4BP2Q86UW6 1770 aaPredicted RBP10.7□□□□□ -0.7
SSR3-201ENST00000265044 GOLGA6L6A8MZA4 724 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms