RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 NECTIN1Q15223 517 aa9.52□□□□□ -0.88
GTF3C3-201ENST00000263956 C15orf52Q6ZUT6 534 aaKnown RBP9.52□□□□□ -0.88
GTF3C3-201ENST00000263956 C2orf69Q8N8R5 385 aa9.52□□□□□ -0.88
GTF3C3-201ENST00000263956 NCOA5Q9HCD5 579 aaKnown RBP9.52□□□□□ -0.88
GTF3C3-201ENST00000263956 ENTPD3O75355 529 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 MYOZ2Q9NPC6 264 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 GLI3P10071 1580 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 DDAH1O94760 285 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 BMP15O95972 392 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 CYP2D6P10635 497 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 TMEM179Q6ZVK1 233 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 AMIGO3Q86WK7 504 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 SMCR8Q8TEV9 937 aaPredicted RBP9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 SLC10A4Q96EP9 437 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 ZNF70Q9UC06 446 aaPredicted RBP9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 PDS5AQ29RF7 1337 aaKnown RBP9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 FAM205AQ6ZU69 1335 aa9.52□□□□□ -0.89
GTF3C3-201ENST00000263956 GPR75-ASB3A0A0A6YYF3 556 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 SSBP05455 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 ZSCAN22P10073 491 aaPredicted RBP9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 CDC42EP5Q6NZY7 148 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 GADL1Q6ZQY3 521 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 CPXCR1Q8N123 301 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 VGLL2Q8N8G2 317 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 FANCBQ8NB91 859 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 SYT17Q9BSW7 474 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 TPM2P07951 284 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 KRT2P35908 639 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 RASA3Q14644 834 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 ADCK5Q3MIX3 580 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 PNMA8AQ86V59 439 aaPredicted RBP9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 HERC5Q9UII4 1024 aaKnown RBP9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 PNMA2Q9UL42 364 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 IVNS1ABPQ9Y6Y0 642 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 PPP4CP60510 307 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 NFKBIBQ15653 356 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 GPATCH4Q5T3I0 446 aaKnown RBP9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 OTUD7BQ6GQQ9 843 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 CTR9Q6PD62 1173 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 STAG1Q8WVM7 1258 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 PDGFDQ9GZP0 370 aaPredicted RBP9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 DOT1LQ8TEK3 1739 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 ANKRD20A12PQ8NF67 263 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 OSBPL5Q9H0X9 879 aaPredicted RBP9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 ZSWIM5Q9P217 1185 aa9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 TFIP11Q9UBB9 837 aaKnown RBP9.51□□□□□ -0.89
GTF3C3-201ENST00000263956 SCN11AQ9UI33 1791 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 KLRF2D3W0D1 207 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 PES1O00541 588 aaKnown RBP9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 FAM151AQ8WW52 585 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 TTC14Q96N46 770 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 CCDC39Q9UFE4 941 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 GOLGA6L3A6NEY3 463 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 LETM1O95202 739 aaPredicted RBP9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 GH2P01242 217 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 ANGEL2Q5VTE6 544 aaKnown RBP9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 SAMD7Q7Z3H4 446 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 DGKHQ86XP1 1220 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 WRNIP1Q96S55 665 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 TCP11L1Q9NUJ3 509 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 PKD1L3Q7Z443 1732 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 ASPRV1Q53RT3 343 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 CEP57L1Q8IYX8 460 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 GGA3Q9NZ52 723 aa9.5□□□□□ -0.89
GTF3C3-201ENST00000263956 SALL1Q9NSC2 1324 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 TMEM232C9JQI7 657 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 C12orf60Q5U649 245 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 ZHX3Q9H4I2 956 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 ADARB2Q9NS39 739 aaKnown RBP9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 ABT1Q9ULW3 272 aaKnown RBP9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 TRIM75PA6NK02 468 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 PFKFB2O60825 505 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 FLOT1O75955 427 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 SBK1Q52WX2 424 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 ZDHHC15Q96MV8 337 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 FLT1P17948 1338 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 FKBP1AP62942 108 aaKnown RBP9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 PHKBQ93100 1093 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 GTF3C6Q969F1 213 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 NAP1L4Q99733 375 aaKnown RBP9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 GPBP1L1Q9HC44 474 aaPredicted RBP9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 ZMYM6O95789 1325 aa9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 FRMPD2Q68DX3 1309 aaPredicted RBP9.49□□□□□ -0.89
GTF3C3-201ENST00000263956 TRAK2O60296 914 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 LIFRP42702 1097 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 ME3Q16798 604 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 APOA5Q6Q788 366 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 BRAPQ7Z569 592 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 BMP3P12645 472 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 ADD1P35611 737 aaKnown RBP9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 UBA7P41226 1012 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 TMEM132AQ24JP5 1023 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 DACT2Q5SW24 774 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 NSMFQ6X4W1 530 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 FCHSD1Q86WN1 690 aa9.48□□□□□ -0.89
GTF3C3-201ENST00000263956 TBC1D10CQ8IV04 446 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms