RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MKNK2Q9HBH9 465 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 PGAP2Q9UHJ9 254 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 SERPINB13Q9UIV8 391 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 LARGE1O95461 756 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 HLA-DOAP06340 250 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 HMGB1P09429 215 aaKnown RBP11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 SHMT1P34896 483 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 APOBRQ0VD83 1088 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 SHROOM1Q2M3G4 852 aaPredicted RBP11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 EAPPQ56P03 285 aaPredicted RBP11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 FKBP1CQ5VVH2 108 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 MIGA2Q7L4E1 593 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 ZNF526Q8TF50 670 aaPredicted RBP11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 BRF1Q92994 677 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 SNX21Q969T3 373 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 DEFB129Q9H1M3 183 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 PI4KBQ9UBF8 816 aa11.49□□□□□ -0.57
SNRNP40-201ENST00000263694 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 FGD1P98174 961 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 TFAP4Q01664 338 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 NBPF12Q5TAG4 269 aaPredicted RBP11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 FAM83AQ86UY5 434 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 RAB11FIP4Q86YS3 637 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 HSCBQ8IWL3 235 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 IGDCC4Q8TDY8 1250 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 ESR2Q92731 530 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 TEPSINQ96N21 525 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 TAF1DQ9H5J8 278 aaPredicted RBP11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 RRAGCQ9HB90 399 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 TPCN1Q9ULQ1 816 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 ATRNL1Q5VV63 1379 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 SCN4AP35499 1836 aa11.48□□□□□ -0.57
SNRNP40-201ENST00000263694 TSPY2A6NKD2 308 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 IFIT3O14879 490 aaKnown RBP11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 AKR1B1P15121 316 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 TNNI2P48788 182 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 JAG1P78504 1218 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 RRP1BQ14684 758 aaKnown RBP11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 TMEM67Q5HYA8 995 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 FOXP4Q8IVH2 680 aaPredicted RBP11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 IPO9Q96P70 1041 aaKnown RBP11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 EHD4Q9H223 541 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 IL17RBQ9NRM6 502 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 BRPF3Q9ULD4 1205 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 FZD1Q9UP38 647 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 WDR90Q96KV7 1748 aa11.47□□□□□ -0.57
SNRNP40-201ENST00000263694 ADM5C9JUS6 153 aa11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 SH2B2O14492 632 aaPredicted RBP11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 GDF11O95390 407 aa11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 STK3Q13188 491 aa11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 ME3Q16798 604 aa11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 USP50Q70EL3 339 aaPredicted RBP11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 METTL16Q86W50 562 aaKnown RBP11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 CLEC10AQ8IUN9 316 aa11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 NECAB1Q8N987 351 aa11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 TMX3Q96JJ7 454 aa11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 TRIM34Q9BYJ4 488 aa11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 ALDH8A1Q9H2A2 487 aaPredicted RBP11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 LY9Q9HBG7 655 aa11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 NAP1L2Q9ULW6 460 aaPredicted RBP11.46□□□□□ -0.57
SNRNP40-201ENST00000263694 TNKSO95271 1327 aa11.46□□□□□ -0.58
SNRNP40-201ENST00000263694 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.58
SNRNP40-201ENST00000263694 TSPY3P0CV98 308 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 TSPY8P0CW00 308 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 PCP11498 1178 aaKnown RBP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 TNFAIP1Q13829 316 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 BECN1Q14457 450 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 APOBEC3FQ8IUX4 373 aaKnown RBP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 ENAHQ8N8S7 591 aaPredicted RBP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 DCPSQ96C86 337 aaKnown RBP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 CHMP4CQ96CF2 233 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 UBAC1Q9BSL1 405 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 MYL10Q9BUA6 226 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 AGXT2Q9BYV1 514 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 NMRK2Q9NPI5 230 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 SWAP70Q9UH65 585 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 LIMCH1Q9UPQ0 1083 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 KLF18A0A0U1RQI7 1052 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 IQCA1LA6NCM1 817 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 MPHOSPH10O00566 681 aaKnown RBP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 RXRAP19793 462 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 SEC23AQ15436 765 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 CERKLQ49MI3 558 aaPredicted RBP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 TATDN1Q6P1N9 297 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 USP48Q86UV5 1035 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 TMEM87BQ96K49 555 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 ZNF287Q9HBT7 754 aa11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 ANGEL1Q9UNK9 670 aaKnown RBP11.45□□□□□ -0.58
SNRNP40-201ENST00000263694 WDR19Q8NEZ3 1342 aa11.44□□□□□ -0.58
SNRNP40-201ENST00000263694 CCT2P78371 535 aaKnown RBP11.44□□□□□ -0.58
SNRNP40-201ENST00000263694 ST3GAL1Q11201 340 aa11.44□□□□□ -0.58
SNRNP40-201ENST00000263694 PRKG1Q13976 671 aa11.44□□□□□ -0.58
SNRNP40-201ENST00000263694 WTAPQ15007 396 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms