RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 MTA3Q9BTC8 594 aa19.99■□□□□ 0.79
LRFN3-201ENST00000246529 HSD3B7Q9H2F3 369 aa19.99■□□□□ 0.79
LRFN3-201ENST00000246529 PDCL3Q9H2J4 239 aa19.99■□□□□ 0.79
LRFN3-201ENST00000246529 ZPR1O75312 459 aa19.99■□□□□ 0.79
LRFN3-201ENST00000246529 RPS6KA4O75676 772 aa19.99■□□□□ 0.79
LRFN3-201ENST00000246529 HIBADHP31937 336 aaKnown RBP19.99■□□□□ 0.79
LRFN3-201ENST00000246529 GTF2F1P35269 517 aaKnown RBP eCLIP19.99■□□□□ 0.79
LRFN3-201ENST00000246529 PKN1Q16512 942 aa19.99■□□□□ 0.79
LRFN3-201ENST00000246529 EARS2Q5JPH6 523 aaKnown RBP19.99■□□□□ 0.79
LRFN3-201ENST00000246529 TNNT1P13805 278 aa19.98■□□□□ 0.79
LRFN3-201ENST00000246529 FAM47AQ5JRC9 791 aa19.98■□□□□ 0.79
LRFN3-201ENST00000246529 PCDHA5Q9Y5H7 936 aa19.98■□□□□ 0.79
LRFN3-201ENST00000246529 V9GY48 417 aaPredicted RBP19.98■□□□□ 0.79
LRFN3-201ENST00000246529 TMC6Q7Z403 805 aa19.98■□□□□ 0.79
LRFN3-201ENST00000246529 ZNF710Q8N1W2 664 aa19.98■□□□□ 0.79
LRFN3-201ENST00000246529 NYXQ9GZU5 481 aa19.98■□□□□ 0.79
LRFN3-201ENST00000246529 BAZ2AQ9UIF9 1905 aaKnown RBP19.97■□□□□ 0.79
LRFN3-201ENST00000246529 DUOX1Q9NRD9 1551 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 SCN7AQ01118 1682 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 FUT2Q10981 343 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 VPS72Q15906 364 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 RILPL1Q5EBL4 403 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 USP49Q70CQ1 688 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 GRAMD1CQ8IYS0 662 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 BMP6P22004 513 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 PTPREP23469 700 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 AKAP17AQ02040 695 aaKnown RBP19.97■□□□□ 0.79
LRFN3-201ENST00000246529 CATIPQ7Z7H3 387 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 PDILTQ8N807 584 aa19.97■□□□□ 0.79
LRFN3-201ENST00000246529 RNF26Q9BY78 433 aaPredicted RBP19.97■□□□□ 0.79
LRFN3-201ENST00000246529 TRMT1Q9NXH9 659 aaKnown RBP19.97■□□□□ 0.79
LRFN3-201ENST00000246529 CCNL1Q9UK58 526 aaPredicted RBP19.97■□□□□ 0.79
LRFN3-201ENST00000246529 CASZ1Q86V15 1759 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 SMTNL1A8MU46 457 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 POLR2DO15514 142 aaKnown RBP19.96■□□□□ 0.79
LRFN3-201ENST00000246529 PRR29P0C7W0 189 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 RCAN1P53805 252 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 PTPN21Q16825 1174 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 NOM1Q5C9Z4 860 aaKnown RBP19.96■□□□□ 0.79
LRFN3-201ENST00000246529 ARHGEF1Q92888 912 aaKnown RBP19.96■□□□□ 0.79
LRFN3-201ENST00000246529 DCP1AQ9NPI6 582 aaPredicted RBP19.96■□□□□ 0.79
LRFN3-201ENST00000246529 TM4SF1P30408 202 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 FANCCQ00597 558 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 PDE4BQ07343 736 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 TROAPQ12815 778 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 IQCA1Q86XH1 822 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 DPF2Q92785 391 aa19.96■□□□□ 0.79
LRFN3-201ENST00000246529 WNT7AO00755 349 aa19.95■□□□□ 0.78
LRFN3-201ENST00000246529 TPM4P67936 248 aa19.95■□□□□ 0.78
LRFN3-201ENST00000246529 MDM2Q00987 491 aaPredicted RBP19.95■□□□□ 0.78
LRFN3-201ENST00000246529 TPTE2Q6XPS3 522 aa19.95■□□□□ 0.78
LRFN3-201ENST00000246529 SERTAD1Q9UHV2 236 aa19.95■□□□□ 0.78
LRFN3-201ENST00000246529 NPHP1O15259 732 aa19.95■□□□□ 0.78
LRFN3-201ENST00000246529 NEMFO60524 1076 aa19.95■□□□□ 0.78
LRFN3-201ENST00000246529 ARMCX5Q6P1M9 558 aa19.95■□□□□ 0.78
LRFN3-201ENST00000246529 CSRNP2Q9H175 543 aa19.95■□□□□ 0.78
LRFN3-201ENST00000246529 IKBKBO14920 756 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 SEMA3EO15041 775 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 FGRP09769 529 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 HSP90AA4PQ58FG1 418 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 RC3H1Q5TC82 1133 aaKnown RBP19.94■□□□□ 0.78
LRFN3-201ENST00000246529 ZNF592Q92610 1267 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 OSBPL5Q9H0X9 879 aaPredicted RBP19.94■□□□□ 0.78
LRFN3-201ENST00000246529 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.94■□□□□ 0.78
LRFN3-201ENST00000246529 RTCBQ9Y3I0 505 aaKnown RBP19.94■□□□□ 0.78
LRFN3-201ENST00000246529 MYH2Q9UKX2 1941 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 TOM1O60784 492 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 MYL5Q02045 173 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 ZNF827Q17R98 1081 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 PHF20Q9BVI0 1012 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 ANKRD2Q9GZV1 360 aa19.94■□□□□ 0.78
LRFN3-201ENST00000246529 CRNKL1Q9BZJ0 848 aaKnown RBP19.93■□□□□ 0.78
LRFN3-201ENST00000246529 BCL11BQ9C0K0 894 aaPredicted RBP19.93■□□□□ 0.78
LRFN3-201ENST00000246529 PRPF3O43395 683 aaKnown RBP19.93■□□□□ 0.78
LRFN3-201ENST00000246529 GPR101Q96P66 508 aaPredicted RBP19.93■□□□□ 0.78
LRFN3-201ENST00000246529 FANCLQ9NW38 375 aa19.93■□□□□ 0.78
LRFN3-201ENST00000246529 SRPRBQ9Y5M8 271 aaKnown RBP19.93■□□□□ 0.78
LRFN3-201ENST00000246529 KRT2P35908 639 aa19.92■□□□□ 0.78
LRFN3-201ENST00000246529 GSDMDP57764 484 aa19.92■□□□□ 0.78
LRFN3-201ENST00000246529 POSTNQ15063 836 aa19.92■□□□□ 0.78
LRFN3-201ENST00000246529 OLFM4Q6UX06 510 aa19.92■□□□□ 0.78
LRFN3-201ENST00000246529 SRBD1Q8N5C6 995 aaKnown RBP19.92■□□□□ 0.78
LRFN3-201ENST00000246529 MAN1B1Q9UKM7 699 aa19.92■□□□□ 0.78
LRFN3-201ENST00000246529 USP17L8P0C7I0 530 aa19.92■□□□□ 0.78
LRFN3-201ENST00000246529 VEGFAP15692 232 aaPredicted RBP19.92■□□□□ 0.78
LRFN3-201ENST00000246529 TMTC3Q6ZXV5 915 aa19.92■□□□□ 0.78
LRFN3-201ENST00000246529 IMPACTQ9P2X3 320 aa19.92■□□□□ 0.78
LRFN3-201ENST00000246529 ZNF831Q5JPB2 1677 aa19.91■□□□□ 0.78
LRFN3-201ENST00000246529 ADAMTS3O15072 1205 aa19.91■□□□□ 0.78
LRFN3-201ENST00000246529 SERPINC1P01008 464 aa19.91■□□□□ 0.78
LRFN3-201ENST00000246529 XBP1P17861 261 aa19.91■□□□□ 0.78
LRFN3-201ENST00000246529 PPP2R5BQ15173 497 aa19.91■□□□□ 0.78
LRFN3-201ENST00000246529 CEP135Q66GS9 1140 aa19.91■□□□□ 0.78
LRFN3-201ENST00000246529 DZIP1Q86YF9 867 aaKnown RBP19.91■□□□□ 0.78
LRFN3-201ENST00000246529 MCM9Q9NXL9 1143 aa19.91■□□□□ 0.78
LRFN3-201ENST00000246529 A0A087X0B3 334 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 TRIM75PA6NK02 468 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 UBASH3AP57075 661 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 GRIK5Q16478 980 aa19.9■□□□□ 0.78
LRFN3-201ENST00000246529 CCAR2Q8N163 923 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms