RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TSGA10IPQ3SY00 556 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 FOCADQ5VW36 1801 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 B4E1Z4 1266 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 AKNAD1Q5T1N1 836 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 MFSD6Q6ZSS7 791 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 AMOTL1Q8IY63 956 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 RNF214Q8ND24 703 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 NEK1Q96PY6 1258 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 ALDH8A1Q9H2A2 487 aaPredicted RBP19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 TSPY26PQ9H489 355 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 ADARB2Q9NS39 739 aaKnown RBP19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 ATP6V1DQ9Y5K8 247 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 CNTNAP1P78357 1384 aa19.84■□□□□ 0.77
CDKN1A-201ENST00000244741 POTECB2RU33 542 aa19.83■□□□□ 0.77
CDKN1A-201ENST00000244741 TOB2Q14106 344 aaPredicted RBP19.83■□□□□ 0.77
CDKN1A-201ENST00000244741 SBK1Q52WX2 424 aa19.83■□□□□ 0.77
CDKN1A-201ENST00000244741 PRAMEF18Q5VWM3 479 aa19.83■□□□□ 0.77
CDKN1A-201ENST00000244741 DLK2Q6UY11 383 aa19.83■□□□□ 0.77
CDKN1A-201ENST00000244741 GGA3Q9NZ52 723 aa19.83■□□□□ 0.77
CDKN1A-201ENST00000244741 ZC3H4Q9UPT8 1303 aaKnown RBP19.83■□□□□ 0.76
CDKN1A-201ENST00000244741 TPRNQ4KMQ1 711 aa19.83■□□□□ 0.76
CDKN1A-201ENST00000244741 EAPPQ56P03 285 aaPredicted RBP19.83■□□□□ 0.76
CDKN1A-201ENST00000244741 L3MBTL3Q96JM7 780 aaPredicted RBP19.83■□□□□ 0.76
CDKN1A-201ENST00000244741 FIBPO43427 364 aa19.82■□□□□ 0.76
CDKN1A-201ENST00000244741 EPHX2P34913 555 aa19.82■□□□□ 0.76
CDKN1A-201ENST00000244741 DNM1Q05193 864 aaKnown RBP19.82■□□□□ 0.76
CDKN1A-201ENST00000244741 VPS37CA5D8V6 355 aaPredicted RBP19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 UBE2HP62256 183 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 RASA3Q14644 834 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 ANKRD1Q15327 319 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 ANAPC4Q9UJX5 808 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 LAMA4Q16363 1823 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 KDM4AO75164 1064 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 MMP14P50281 582 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 KRT32Q14532 448 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 FAM47AQ5JRC9 791 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 RALYLQ86SE5 291 aaKnown RBP19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 ZSCAN30Q86W11 494 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 STAG1Q8WVM7 1258 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 CSRNP1Q96S65 589 aa19.81■□□□□ 0.76
CDKN1A-201ENST00000244741 RANBP6O60518 1105 aaKnown RBP19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 TRDNQ13061 729 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 LARP1BQ659C4 914 aaKnown RBP19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 NCOA7Q8NI08 942 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 ZKSCAN3Q9BRR0 538 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 RRAGCQ9HB90 399 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 DDX60LQ5H9U9 1706 aaKnown RBP19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 ENTPD3O75355 529 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 POTEIP0CG38 1075 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 POTEJP0CG39 1038 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 CYB5R4Q7L1T6 521 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 TTC6Q86TZ1 520 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 FAM151AQ8WW52 585 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 DEFB129Q9H1M3 183 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 MKNK2Q9HBH9 465 aa19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 GPHNQ9NQX3 736 aaPredicted RBP19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 POLR2AP24928 1970 aaKnown RBP19.8■□□□□ 0.76
CDKN1A-201ENST00000244741 LAMB1P07942 1786 aa19.79■□□□□ 0.76
CDKN1A-201ENST00000244741 CCDC183Q5T5S1 534 aa19.79■□□□□ 0.76
CDKN1A-201ENST00000244741 MIGA2Q7L4E1 593 aa19.79■□□□□ 0.76
CDKN1A-201ENST00000244741 TAF1DQ9H5J8 278 aaPredicted RBP19.79■□□□□ 0.76
CDKN1A-201ENST00000244741 ZSWIM5Q9P217 1185 aa19.79■□□□□ 0.76
CDKN1A-201ENST00000244741 HLA-DOAP06340 250 aa19.78■□□□□ 0.76
CDKN1A-201ENST00000244741 SLC3A2P08195 630 aaKnown RBP19.78■□□□□ 0.76
CDKN1A-201ENST00000244741 CDK8P49336 464 aa19.78■□□□□ 0.76
CDKN1A-201ENST00000244741 HS1BP3Q53T59 392 aa19.78■□□□□ 0.76
CDKN1A-201ENST00000244741 CRACR2BQ8N4Y2 399 aaPredicted RBP19.78■□□□□ 0.76
CDKN1A-201ENST00000244741 SERPINB13Q9UIV8 391 aa19.78■□□□□ 0.76
CDKN1A-201ENST00000244741 PDE4BQ07343 736 aa19.78■□□□□ 0.76
CDKN1A-201ENST00000244741 MB21D2Q8IYB1 491 aaPredicted RBP19.78■□□□□ 0.76
CDKN1A-201ENST00000244741 DNAJC18Q9H819 358 aa19.78■□□□□ 0.76
CDKN1A-201ENST00000244741 ANTXR2P58335 489 aa19.77■□□□□ 0.76
CDKN1A-201ENST00000244741 STK3Q13188 491 aa19.77■□□□□ 0.76
CDKN1A-201ENST00000244741 DHX36Q9H2U1 1008 aaKnown RBP19.77■□□□□ 0.76
CDKN1A-201ENST00000244741 RNF41Q9H4P4 317 aaPredicted RBP19.77■□□□□ 0.76
CDKN1A-201ENST00000244741 NMRK2Q9NPI5 230 aa19.77■□□□□ 0.76
CDKN1A-201ENST00000244741 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
CDKN1A-201ENST00000244741 FZD1Q9UP38 647 aa19.77■□□□□ 0.76
CDKN1A-201ENST00000244741 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.77■□□□□ 0.76
CDKN1A-201ENST00000244741 NMT2O60551 498 aa19.77■□□□□ 0.75
CDKN1A-201ENST00000244741 SHROOM1Q2M3G4 852 aaPredicted RBP19.77■□□□□ 0.75
CDKN1A-201ENST00000244741 FKBP1CQ5VVH2 108 aa19.77■□□□□ 0.75
CDKN1A-201ENST00000244741 C16orf86Q6ZW13 317 aa19.77■□□□□ 0.75
CDKN1A-201ENST00000244741 CDC37L1Q7L3B6 337 aa19.77■□□□□ 0.75
CDKN1A-201ENST00000244741 DHX32Q7L7V1 743 aaKnown RBP19.77■□□□□ 0.75
CDKN1A-201ENST00000244741 IQCA1LA6NCM1 817 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 PRC1O43663 620 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 NPM3O75607 178 aaKnown RBP19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 TNNI2P48788 182 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 TNFAIP1Q13829 316 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 Q6ZUG5 572 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 FAM83AQ86UY5 434 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 ADM5C9JUS6 153 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 FGD1P98174 961 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 GABPAQ06546 454 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 CSPP1Q1MSJ5 1256 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 NBPF12Q5TAG4 269 aaPredicted RBP19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 FERMT3Q86UX7 667 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 TEPSINQ96N21 525 aa19.76■□□□□ 0.75
CDKN1A-201ENST00000244741 NAP1L5Q96NT1 182 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms