RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CCDC144BQ3MJ40 725 aa25.22■■□□□ 1.63
RNF39-201ENST00000244360 RILPL1Q5EBL4 403 aa25.22■■□□□ 1.63
RNF39-201ENST00000244360 TFCP2L1Q9NZI6 479 aa25.22■■□□□ 1.63
RNF39-201ENST00000244360 LAMB1P07942 1786 aa25.22■■□□□ 1.63
RNF39-201ENST00000244360 MYH2Q9UKX2 1941 aa25.22■■□□□ 1.63
RNF39-201ENST00000244360 TNNT1P13805 278 aa25.22■■□□□ 1.63
RNF39-201ENST00000244360 CMTR1Q8N1G2 835 aaKnown RBP25.21■■□□□ 1.63
RNF39-201ENST00000244360 KRI1Q8N9T8 703 aaKnown RBP25.21■■□□□ 1.63
RNF39-201ENST00000244360 CLIC6Q96NY7 704 aa25.21■■□□□ 1.63
RNF39-201ENST00000244360 CRNKL1Q9BZJ0 848 aaKnown RBP25.21■■□□□ 1.63
RNF39-201ENST00000244360 SPATA31A6Q5VVP1 1343 aa25.21■■□□□ 1.63
RNF39-201ENST00000244360 KIAA1551Q9HCM1 1747 aa25.21■■□□□ 1.63
RNF39-201ENST00000244360 USP17L12C9JPN9 530 aa25.21■■□□□ 1.63
RNF39-201ENST00000244360 USP17L21D6R901 530 aa25.21■■□□□ 1.63
RNF39-201ENST00000244360 IGSF3O75054 1194 aa25.21■■□□□ 1.63
RNF39-201ENST00000244360 IQCA1Q86XH1 822 aa25.21■■□□□ 1.63
RNF39-201ENST00000244360 C16orf45Q96MC5 204 aaPredicted RBP25.21■■□□□ 1.63
RNF39-201ENST00000244360 DCP1AQ9NPI6 582 aaPredicted RBP25.21■■□□□ 1.63
RNF39-201ENST00000244360 ATP8A2Q9NTI2 1148 aa25.21■■□□□ 1.63
RNF39-201ENST00000244360 TAOK2Q9UL54 1235 aa25.21■■□□□ 1.63
RNF39-201ENST00000244360 TPD52L1Q16890 204 aaPredicted RBP25.2■■□□□ 1.62
RNF39-201ENST00000244360 IFIT1BQ5T764 474 aaKnown RBP25.2■■□□□ 1.62
RNF39-201ENST00000244360 ELOA2Q8IYF1 753 aaPredicted RBP25.2■■□□□ 1.62
RNF39-201ENST00000244360 CCDC24Q8N4L8 307 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 MORC2Q9Y6X9 1032 aaPredicted RBP25.2■■□□□ 1.62
RNF39-201ENST00000244360 DDAH1O94760 285 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 CALM1P0DP23 149 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 CALM2P0DP24 149 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 CALM3P0DP25 149 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 PRDX5P30044 214 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 SBK1Q52WX2 424 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 CATIPQ7Z7H3 387 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 PDCL2Q8N4E4 241 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 CCDC82Q8N4S0 544 aa25.2■■□□□ 1.62
RNF39-201ENST00000244360 RBM28Q9NW13 759 aaKnown RBP25.2■■□□□ 1.62
RNF39-201ENST00000244360 TROAPQ12815 778 aa25.19■■□□□ 1.62
RNF39-201ENST00000244360 PRPF3O43395 683 aaKnown RBP25.18■■□□□ 1.62
RNF39-201ENST00000244360 PTPREP23469 700 aa25.18■■□□□ 1.62
RNF39-201ENST00000244360 GSDMDP57764 484 aa25.18■■□□□ 1.62
RNF39-201ENST00000244360 DHX8Q14562 1220 aaKnown RBP25.18■■□□□ 1.62
RNF39-201ENST00000244360 PKN1Q16512 942 aa25.18■■□□□ 1.62
RNF39-201ENST00000244360 TXNRD3Q86VQ6 643 aa25.18■■□□□ 1.62
RNF39-201ENST00000244360 FBXW7Q969H0 707 aa25.18■■□□□ 1.62
RNF39-201ENST00000244360 SHISA4Q96DD7 197 aa25.18■■□□□ 1.62
RNF39-201ENST00000244360 AATFQ9NY61 560 aaKnown RBP eCLIP25.18■■□□□ 1.62
RNF39-201ENST00000244360 FBXO2Q9UK22 296 aaPredicted RBP25.18■■□□□ 1.62
RNF39-201ENST00000244360 ARPP21Q9UBL0 812 aaPredicted RBP25.18■■□□□ 1.62
RNF39-201ENST00000244360 KCNH3Q9ULD8 1083 aa25.18■■□□□ 1.62
RNF39-201ENST00000244360 MYH6P13533 1939 aa25.18■■□□□ 1.62
RNF39-201ENST00000244360 PRDM1O75626 825 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 NR5A1Q13285 461 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 NCAPHQ15003 741 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 KCND1Q9NSA2 647 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 IMPACTQ9P2X3 320 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 SBF2Q86WG5 1849 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 CCDC88AQ3V6T2 1871 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 BIN1O00499 593 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 IKBKBO14920 756 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 FAM182BQ5T319 152 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 SPTY2D1Q68D10 685 aaPredicted RBP25.17■■□□□ 1.62
RNF39-201ENST00000244360 KRBA2Q6ZNG9 492 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 ZNF579Q8NAF0 562 aaKnown RBP25.17■■□□□ 1.62
RNF39-201ENST00000244360 OXER1Q8TDS5 423 aa25.17■■□□□ 1.62
RNF39-201ENST00000244360 AKAP17AQ02040 695 aaKnown RBP25.16■■□□□ 1.62
RNF39-201ENST00000244360 GRAPQ13588 217 aa25.16■■□□□ 1.62
RNF39-201ENST00000244360 CCDC112Q8NEF3 446 aa25.16■■□□□ 1.62
RNF39-201ENST00000244360 GRAPLQ8TC17 118 aaPredicted RBP25.16■■□□□ 1.62
RNF39-201ENST00000244360 PHF20Q9BVI0 1012 aa25.16■■□□□ 1.62
RNF39-201ENST00000244360 XBP1P17861 261 aa25.16■■□□□ 1.62
RNF39-201ENST00000244360 RFC4P35249 363 aa25.16■■□□□ 1.62
RNF39-201ENST00000244360 METTL16Q86W50 562 aaKnown RBP25.16■■□□□ 1.62
RNF39-201ENST00000244360 LONRF3Q496Y0 759 aa25.15■■□□□ 1.62
RNF39-201ENST00000244360 PPP4R3BQ5MIZ7 849 aa25.15■■□□□ 1.62
RNF39-201ENST00000244360 TRAPPC3LQ5T215 181 aa25.15■■□□□ 1.62
RNF39-201ENST00000244360 TMTC3Q6ZXV5 915 aa25.15■■□□□ 1.62
RNF39-201ENST00000244360 CEP131Q9UPN4 1083 aa25.15■■□□□ 1.62
RNF39-201ENST00000244360 LEMD3Q9Y2U8 911 aa25.15■■□□□ 1.62
RNF39-201ENST00000244360 PLEKHA8P1O95397 391 aa25.14■■□□□ 1.62
RNF39-201ENST00000244360 TPM4P67936 248 aa25.14■■□□□ 1.62
RNF39-201ENST00000244360 EVX2Q03828 476 aa25.14■■□□□ 1.62
RNF39-201ENST00000244360 NFIXQ14938 502 aa25.14■■□□□ 1.62
RNF39-201ENST00000244360 CEP135Q66GS9 1140 aa25.14■■□□□ 1.62
RNF39-201ENST00000244360 PCDHB6Q9Y5E3 794 aa25.14■■□□□ 1.62
RNF39-201ENST00000244360 SKILP12757 684 aa25.14■■□□□ 1.61
RNF39-201ENST00000244360 NT5C2P49902 561 aa25.13■■□□□ 1.61
RNF39-201ENST00000244360 PNOCQ13519 176 aa25.13■■□□□ 1.61
RNF39-201ENST00000244360 ARID3AQ99856 593 aa25.13■■□□□ 1.61
RNF39-201ENST00000244360 OSBPL5Q9H0X9 879 aaPredicted RBP25.13■■□□□ 1.61
RNF39-201ENST00000244360 SRPRBQ9Y5M8 271 aaKnown RBP25.13■■□□□ 1.61
RNF39-201ENST00000244360 MDM2Q00987 491 aaPredicted RBP25.13■■□□□ 1.61
RNF39-201ENST00000244360 C15orf52Q6ZUT6 534 aaKnown RBP25.13■■□□□ 1.61
RNF39-201ENST00000244360 CNNM3Q8NE01 707 aa25.13■■□□□ 1.61
RNF39-201ENST00000244360 VPS54Q9P1Q0 977 aa25.13■■□□□ 1.61
RNF39-201ENST00000244360 CNTNAP5Q8WYK1 1306 aa25.12■■□□□ 1.61
RNF39-201ENST00000244360 KIF2AO00139 706 aaPredicted RBP25.12■■□□□ 1.61
RNF39-201ENST00000244360 DZIP1Q86YF9 867 aaKnown RBP25.12■■□□□ 1.61
RNF39-201ENST00000244360 WDR66Q8TBY9 1149 aa25.12■■□□□ 1.61
RNF39-201ENST00000244360 GJD4Q96KN9 370 aaPredicted RBP25.12■■□□□ 1.61
RNF39-201ENST00000244360 MKRN1Q9UHC7 482 aaKnown RBP25.12■■□□□ 1.61
RNF39-201ENST00000244360 CYP2D6P10635 497 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms