RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.37□□□□□ -1.07
RIF1-201ENST00000243326 PPP1R12AO14974 1030 aaPredicted RBP8.37□□□□□ -1.07
RIF1-201ENST00000243326 DDX41Q9UJV9 622 aaKnown RBP8.37□□□□□ -1.07
RIF1-201ENST00000243326 CASP14P31944 242 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 SPAG1Q07617 926 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.071e-6■■■□□ 16
RIF1-201ENST00000243326 STAC3Q96MF2 364 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 RBL2Q08999 1139 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 RIMS2Q9UQ26 1411 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 ARID1AO14497 2285 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 SNRPA1P09661 255 aaKnown RBP8.37□□□□□ -1.07
RIF1-201ENST00000243326 TNFAIP3P21580 790 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 TNNI3KQ59H18 835 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 AGTPBP1Q9UPW5 1226 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 PTPN22Q9Y2R2 807 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 FPGT-TNNI3KV9GXZ4 949 aa8.37□□□□□ -1.07
RIF1-201ENST00000243326 CFAP65Q6ZU64 1925 aaKnown RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 CETN1Q12798 172 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 SEL1L2Q5TEA6 688 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 GDAP1Q8TB36 358 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 LONRF2Q1L5Z9 754 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 PARD6BQ9BYG5 372 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 WDR66Q8TBY9 1149 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 TMOD2Q9NZR1 351 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 FTCDO95954 541 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 MCUR1Q96AQ8 359 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 NOX5Q96PH1 765 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 SRGAP2O75044 1071 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 CASP1P29466 404 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 ERFP50548 548 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 VPS52Q8N1B4 723 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 MTRF1LQ9UGC7 380 aaKnown RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 TTF2Q9UNY4 1162 aaKnown RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 UGGT2Q9NYU1 1516 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 E7EWF7 191 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 KRT15P19012 456 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 MUM1Q2TAK8 710 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 USH1GQ495M9 461 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 AMOTQ4VCS5 1084 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 OSCARQ8IYS5 282 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 XAGE2Q96GT9 111 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 EPSTI1Q96J88 318 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 TRIM6Q9C030 488 aaPredicted RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 PER1O15534 1290 aaPredicted RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 DESP17661 470 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 GPHNQ9NQX3 736 aaPredicted RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 CCDC110Q8TBZ0 833 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 GBP5Q96PP8 586 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 CTNNA1P35221 906 aaKnown RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 MRPS9P82933 396 aaKnown RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 RASSF7Q02833 373 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 IFT20Q8IY31 132 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 DDX27Q96GQ7 796 aaKnown RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 IFIH1Q9BYX4 1025 aaKnown RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 CTTNBP2NLQ9P2B4 639 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 UTP11Q9Y3A2 253 aaKnown RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 ATP1A3P13637 1013 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 THEMISQ8N1K5 641 aaPredicted RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 ABTB1Q969K4 478 aaPredicted RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 GPAA1O43292 621 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 FERP16591 822 aa8.36□□□□□ -1.07
RIF1-201ENST00000243326 GPR161Q8N6U8 529 aaKnown RBP8.36□□□□□ -1.07
RIF1-201ENST00000243326 CETN3O15182 167 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 ADD1P35611 737 aaKnown RBP8.35□□□□□ -1.07
RIF1-201ENST00000243326 PPFIBP2Q8ND30 876 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 RASGRP4Q8TDF6 673 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 CCDC77Q9BR77 488 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 MORC3Q14149 939 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 CDC25AP30304 524 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 KRT79Q5XKE5 535 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 TOGARAM2Q6ZUX3 1019 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 SMARCC2Q8TAQ2 1214 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 TTC36A6NLP5 189 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 SAT1P21673 171 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 BIRC3Q13489 604 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 MAP7D1Q3KQU3 841 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 PCDHA7Q9UN72 937 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 ZNF652Q9Y2D9 606 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 MYO18AQ92614 2054 aaKnown RBP8.35□□□□□ -1.07
RIF1-201ENST00000243326 WDR91A4D1P6 747 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 UQCRFS1P1P0C7P4 283 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 LCA5Q86VQ0 697 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
RIF1-201ENST00000243326 BLMP54132 1417 aaPredicted RBP8.35□□□□□ -1.07
RIF1-201ENST00000243326 ARHGAP42A6NI28 874 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 HDLBPQ00341 1268 aaKnown RBP8.35□□□□□ -1.07
RIF1-201ENST00000243326 FYB2Q5VWT5 728 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 PEX26Q7Z412 305 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 LMNTD2Q8IXW0 634 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 MRFAP1Q9Y605 127 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 MOCS3O95396 460 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 GRM1Q13255 1194 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 KAZNQ674X7 775 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 CCDC105Q8IYK2 499 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 RRP36Q96EU6 259 aaKnown RBP8.35□□□□□ -1.07
RIF1-201ENST00000243326 ZNF287Q9HBT7 754 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 B4DLN1 442 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 CALCOCO2Q13137 446 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 LRRC41Q15345 812 aa8.35□□□□□ -1.07
RIF1-201ENST00000243326 AIFM3Q96NN9 605 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 307.1 ms