RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TMOD4Q9NZQ9 345 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.37□□□□□ -0.43
COPA-201ENST00000241704 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 SEC62Q99442 399 aaKnown RBP12.37□□□□□ -0.43
COPA-201ENST00000241704 NCOA5Q9HCD5 579 aaKnown RBP12.37□□□□□ -0.43
COPA-201ENST00000241704 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 GTF2IP78347 998 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 PPP1R13BQ96KQ4 1090 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 ZSWIM6Q9HCJ5 1215 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 TLR7Q9NYK1 1049 aaKnown RBP12.37□□□□□ -0.43
COPA-201ENST00000241704 MTMR6Q9Y217 621 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 H7C1W4 665 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 HSPD1P10809 573 aaKnown RBP12.37□□□□□ -0.43
COPA-201ENST00000241704 KRT2P35908 639 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 MTX1Q13505 466 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 MAP4K1Q92918 833 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 LSG1Q9H089 658 aaKnown RBP12.37□□□□□ -0.43
COPA-201ENST00000241704 ADAM21Q9UKJ8 722 aa12.37□□□□□ -0.43
COPA-201ENST00000241704 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
COPA-201ENST00000241704 KIF1CO43896 1103 aaKnown RBP12.36□□□□□ -0.43
COPA-201ENST00000241704 UBASH3AP57075 661 aa12.36□□□□□ -0.43
COPA-201ENST00000241704 SARNPP82979 210 aaKnown RBP12.36□□□□□ -0.43
COPA-201ENST00000241704 ISM2Q6H9L7 571 aa12.36□□□□□ -0.43
COPA-201ENST00000241704 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
COPA-201ENST00000241704 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
COPA-201ENST00000241704 IGKV5-2P06315 115 aa12.36□□□□□ -0.43
COPA-201ENST00000241704 PDE6AP16499 860 aa12.36□□□□□ -0.43
COPA-201ENST00000241704 RBM6P78332 1123 aaKnown RBP12.36□□□□□ -0.43
COPA-201ENST00000241704 FKBP15Q5T1M5 1219 aa12.36□□□□□ -0.43
COPA-201ENST00000241704 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
COPA-201ENST00000241704 IVNS1ABPQ9Y6Y0 642 aa12.36□□□□□ -0.43
COPA-201ENST00000241704 DEXIO95424 95 aa12.36□□□□□ -0.43
COPA-201ENST00000241704 PPP2R5BQ15173 497 aa12.36□□□□□ -0.43
COPA-201ENST00000241704 LEO1Q8WVC0 666 aaPredicted RBP12.36□□□□□ -0.43
COPA-201ENST00000241704 BCCIPQ9P287 314 aaKnown RBP eCLIP12.36□□□□□ -0.43
COPA-201ENST00000241704 A0A087WUV0 522 aaPredicted RBP12.35□□□□□ -0.43
COPA-201ENST00000241704 EIF3CLB5ME19 914 aaKnown RBP12.35□□□□□ -0.43
COPA-201ENST00000241704 CHRNDQ07001 517 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 STXBP4Q6ZWJ1 553 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 EIF3CQ99613 913 aaKnown RBP12.35□□□□□ -0.43
COPA-201ENST00000241704 LRRC27Q9C0I9 530 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 GOLGA6L7A0A1B0GV03 622 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 SASH1O94885 1247 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 INPP5BP32019 993 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
COPA-201ENST00000241704 ARHGEF10LQ9HCE6 1279 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 CTAGE15A4D2H0 777 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 PRDM1O75626 825 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 CTAGE8P0CG41 777 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 GNA11P29992 359 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 BCAMP50895 628 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 GYS2P54840 703 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 TCP10Q12799 353 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 UBE4AQ14139 1066 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 ME3Q16798 604 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 MFSD14BQ5SR56 506 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 AKNAD1Q5T1N1 836 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 FAM173BQ6P4H8 233 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 CTAGE6Q86UF2 777 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 CTAGE4Q8IX94 777 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 DHX37Q8IY37 1157 aaKnown RBP12.35□□□□□ -0.43
COPA-201ENST00000241704 RMND1Q9NWS8 449 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 CRB1P82279 1406 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 TNFAIP1Q13829 316 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 UBE3CQ15386 1083 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 PHLPP2Q6ZVD8 1323 aa12.35□□□□□ -0.43
COPA-201ENST00000241704 USP27XA6NNY8 438 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 CTDSPL2Q05D32 466 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 ZYXQ15942 572 aaKnown RBP12.34□□□□□ -0.43
COPA-201ENST00000241704 SYCP3Q8IZU3 236 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 ZCCHC17Q9NP64 241 aaKnown RBP12.34□□□□□ -0.43
COPA-201ENST00000241704 TTF2Q9UNY4 1162 aaKnown RBP12.34□□□□□ -0.43
COPA-201ENST00000241704 TMEM131LA2VDJ0 1609 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 SSR1P43307 286 aaKnown RBP12.34□□□□□ -0.43
COPA-201ENST00000241704 GYG1P46976 350 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 RILPL1Q5EBL4 403 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 OTUD6BQ8N6M0 293 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 DIP2AQ14689 1571 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 TBCAO75347 108 aaKnown RBP12.34□□□□□ -0.43
COPA-201ENST00000241704 NEBLO76041 1014 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 SERPINB2P05120 415 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 ADORA1P30542 326 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 PHKA1P46020 1223 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 SETD1BQ9UPS6 1966 aaKnown RBP12.34□□□□□ -0.43
COPA-201ENST00000241704 CETN1Q12798 172 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 ZMYM1Q5SVZ6 1142 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 CCDC181Q5TID7 509 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 RABGGTAQ92696 567 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 ZNF274Q96GC6 653 aaPredicted RBP12.34□□□□□ -0.43
COPA-201ENST00000241704 PUF60Q9UHX1 559 aaKnown RBP12.34□□□□□ -0.43
COPA-201ENST00000241704 REREQ9P2R6 1566 aa12.34□□□□□ -0.43
COPA-201ENST00000241704 AFMP43652 599 aa12.33□□□□□ -0.44
COPA-201ENST00000241704 CCDC144BQ3MJ40 725 aa12.33□□□□□ -0.44
COPA-201ENST00000241704 TCERG1LQ5VWI1 586 aa12.33□□□□□ -0.44
COPA-201ENST00000241704 IQCEQ6IPM2 695 aa12.33□□□□□ -0.44
COPA-201ENST00000241704 PDE11AQ9HCR9 933 aa12.33□□□□□ -0.44
COPA-201ENST00000241704 FGAP02671 866 aa12.33□□□□□ -0.44
COPA-201ENST00000241704 PARP1P09874 1014 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms