RNA–Protein interactions for RNA: ENST00000239852.10

MTRF1-201, Transcript of mitochondrial translation release factor 1, humanhuman

TSL 1 (best)

Gene MTRF1, Length 1,561 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTRF1-201ENST00000239852 SHHQ15465 462 aa8.82□□□□□ -1
MTRF1-201ENST00000239852 PTPROQ16827 1216 aa8.82□□□□□ -1
MTRF1-201ENST00000239852 KHSRPQ92945 711 aaKnown RBP eCLIP8.82□□□□□ -12e-8■■■□□ 18.9
MTRF1-201ENST00000239852 ARPC5LQ9BPX5 153 aa8.82□□□□□ -1
MTRF1-201ENST00000239852 NUCKS1Q9H1E3 243 aaKnown RBP8.82□□□□□ -1
MTRF1-201ENST00000239852 ZHX1Q9UKY1 873 aaPredicted RBP8.82□□□□□ -1
MTRF1-201ENST00000239852 CTDP1Q9Y5B0 961 aaPredicted RBP8.82□□□□□ -1
MTRF1-201ENST00000239852 LAMB2P55268 1798 aa8.82□□□□□ -1
MTRF1-201ENST00000239852 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
MTRF1-201ENST00000239852 USP17L8P0C7I0 530 aa8.81□□□□□ -1
MTRF1-201ENST00000239852 SETSIPP0DME0 302 aa8.81□□□□□ -1
MTRF1-201ENST00000239852 NAP1L1P55209 391 aaKnown RBP8.81□□□□□ -1
MTRF1-201ENST00000239852 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
MTRF1-201ENST00000239852 PDE3AQ14432 1141 aa8.81□□□□□ -1
MTRF1-201ENST00000239852 DDX60Q8IY21 1712 aaKnown RBP8.81□□□□□ -1
MTRF1-201ENST00000239852 TTC5Q8N0Z6 440 aa8.81□□□□□ -1
MTRF1-201ENST00000239852 ZCCHC17Q9NP64 241 aaKnown RBP8.81□□□□□ -1
MTRF1-201ENST00000239852 ODF2LQ9ULJ1 636 aa8.81□□□□□ -1
MTRF1-201ENST00000239852 CCL15-CCL14A0A0B4J2E2 113 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 CCDC189A1A4V9 331 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 NBPF26B4DH59 902 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 IPO5O00410 1097 aaKnown RBP8.8□□□□□ -1
MTRF1-201ENST00000239852 ADCY3O60266 1144 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 PSMD2Q13200 908 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 EIF4A2Q14240 407 aaKnown RBP8.8□□□□□ -1
MTRF1-201ENST00000239852 GSE1Q14687 1217 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 CCL15Q16663 113 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 RSBN1LQ6PCB5 846 aaPredicted RBP8.8□□□□□ -1
MTRF1-201ENST00000239852 CCDC73Q6ZRK6 1079 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 CATIPQ7Z7H3 387 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 ZSCAN30Q86W11 494 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 CCDC146Q8IYE0 955 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 KCNB2Q92953 911 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 CEP63Q96MT8 703 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 NCAPGQ9BPX3 1015 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 MAP3K20Q9NYL2 800 aaKnown RBP8.8□□□□□ -1
MTRF1-201ENST00000239852 METRNQ9UJH8 293 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 FZD1Q9UP38 647 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 IVNS1ABPQ9Y6Y0 642 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 HEG1Q9ULI3 1381 aa8.8□□□□□ -1
MTRF1-201ENST00000239852 MAP1BP46821 2468 aaKnown RBP8.8□□□□□ -1
MTRF1-201ENST00000239852 ABCC4O15439 1325 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 DUOX1Q9NRD9 1551 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 GFRA3O60609 400 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 PAX7P23759 505 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 PRKCZQ05513 592 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 CCDC174Q6PII3 467 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 APOBEC3FQ8IUX4 373 aaKnown RBP8.79□□□□□ -1
MTRF1-201ENST00000239852 DRC7Q8IY82 874 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 PXYLP1Q8TE99 480 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 RSPH1Q8WYR4 309 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 ERCC4Q92889 916 aaPredicted RBP8.79□□□□□ -1
MTRF1-201ENST00000239852 CALR3Q96L12 384 aaKnown RBP8.79□□□□□ -1
MTRF1-201ENST00000239852 NAP1L4Q99733 375 aaKnown RBP8.79□□□□□ -1
MTRF1-201ENST00000239852 ZNF576Q9H609 170 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 SMC4Q9NTJ3 1288 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 GABBR1Q9UBS5 961 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 NAV2Q8IVL1 2488 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 SCN9AQ15858 1988 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 IBTKQ9P2D0 1353 aaPredicted RBP8.79□□□□□ -1
MTRF1-201ENST00000239852 GVINP1Q7Z2Y8 2422 aa8.79□□□□□ -1
MTRF1-201ENST00000239852 DDX60LQ5H9U9 1706 aaKnown RBP8.78□□□□□ -1
MTRF1-201ENST00000239852 KCNQ1P51787 676 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 GTF2A2P52657 109 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 CCDC85BQ15834 202 aaPredicted RBP8.78□□□□□ -1
MTRF1-201ENST00000239852 C9orf50Q5SZB4 431 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 C17orf99Q6UX52 265 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 ZBTB38Q8NAP3 1195 aaPredicted RBP8.78□□□□□ -1
MTRF1-201ENST00000239852 VPS37AQ8NEZ2 397 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 GMLQ99445 158 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 CDC5LQ99459 802 aaKnown RBP8.78□□□□□ -1
MTRF1-201ENST00000239852 LGR6Q9HBX8 967 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 DONSONQ9NYP3 566 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 PFASO15067 1338 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 TPM3P06753 285 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 IREB2P48200 963 aaKnown RBP8.78□□□□□ -1
MTRF1-201ENST00000239852 DOK7Q18PE1 504 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 OPTNQ96CV9 577 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 POLR3CQ9BUI4 534 aaPredicted RBP8.78□□□□□ -1
MTRF1-201ENST00000239852 C22orf23Q9BZE7 217 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.78□□□□□ -1
MTRF1-201ENST00000239852 CXorf56Q9H5V9 222 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 SCUBE2Q9NQ36 999 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 SUN2Q9UH99 717 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 PAXBP1Q9Y5B6 917 aa8.78□□□□□ -1
MTRF1-201ENST00000239852 COL1A1P02452 1464 aaPredicted RBP8.77□□□□□ -1
MTRF1-201ENST00000239852 WNT10BO00744 389 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 RIMBP2O15034 1052 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 RNMTO43148 476 aaKnown RBP8.77□□□□□ -1.01
MTRF1-201ENST00000239852 HOXA2O43364 376 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 KIF5CO60282 957 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 NAT1P18440 290 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 ATICP31939 592 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 ABCD1P33897 745 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 TFF2Q03403 129 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 IFT88Q13099 833 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 NAALADL2Q58DX5 795 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 C3orf67Q6ZVT6 689 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 NLRP3Q96P20 1036 aa8.77□□□□□ -1.01
MTRF1-201ENST00000239852 RPS6KC1Q96S38 1066 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms