RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CLIC6Q96NY7 704 aa18.63■□□□□ 0.57
UBE3D-201ENST00000237186 CYP2D7A0A087X1C5 515 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 XBP1P17861 261 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 LRMPQ12912 555 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 NCAPHQ15003 741 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 PKN1Q16512 942 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 SPTY2D1Q68D10 685 aaPredicted RBP18.62■□□□□ 0.57
UBE3D-201ENST00000237186 AMIGO3Q86WK7 504 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 LRRC8AQ8IWT6 810 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 NOL10Q9BSC4 688 aaKnown RBP18.62■□□□□ 0.57
UBE3D-201ENST00000237186 TFCP2L1Q9NZI6 479 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 KCNH3Q9ULD8 1083 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 DUOX1Q9NRD9 1551 aa18.62■□□□□ 0.57
UBE3D-201ENST00000237186 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.61■□□□□ 0.57
UBE3D-201ENST00000237186 GTF2F1P35269 517 aaKnown RBP eCLIP18.61■□□□□ 0.57
UBE3D-201ENST00000237186 KRBA2Q6ZNG9 492 aa18.61■□□□□ 0.57
UBE3D-201ENST00000237186 CMTR1Q8N1G2 835 aaKnown RBP18.61■□□□□ 0.57
UBE3D-201ENST00000237186 ARPP21Q9UBL0 812 aaPredicted RBP18.61■□□□□ 0.57
UBE3D-201ENST00000237186 FBXO2Q9UK22 296 aaPredicted RBP18.61■□□□□ 0.57
UBE3D-201ENST00000237186 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
UBE3D-201ENST00000237186 SBF2Q86WG5 1849 aa18.61■□□□□ 0.57
UBE3D-201ENST00000237186 RRP9O43818 475 aaKnown RBP18.6■□□□□ 0.57
UBE3D-201ENST00000237186 PRDX5P30044 214 aa18.6■□□□□ 0.57
UBE3D-201ENST00000237186 AKAP17AQ02040 695 aaKnown RBP18.6■□□□□ 0.57
UBE3D-201ENST00000237186 CCDC82Q8N4S0 544 aa18.6■□□□□ 0.57
UBE3D-201ENST00000237186 BCL11BQ9C0K0 894 aaPredicted RBP18.6■□□□□ 0.57
UBE3D-201ENST00000237186 IMPACTQ9P2X3 320 aa18.6■□□□□ 0.57
UBE3D-201ENST00000237186 CEP131Q9UPN4 1083 aa18.6■□□□□ 0.57
UBE3D-201ENST00000237186 SRPRBQ9Y5M8 271 aaKnown RBP18.6■□□□□ 0.57
UBE3D-201ENST00000237186 TPM4P67936 248 aa18.6■□□□□ 0.57
UBE3D-201ENST00000237186 MDM2Q00987 491 aaPredicted RBP18.6■□□□□ 0.57
UBE3D-201ENST00000237186 NR5A1Q13285 461 aa18.6■□□□□ 0.57
UBE3D-201ENST00000237186 LONRF3Q496Y0 759 aa18.6■□□□□ 0.57
UBE3D-201ENST00000237186 TRAPPC3LQ5T215 181 aa18.6■□□□□ 0.57
UBE3D-201ENST00000237186 PHF20Q9BVI0 1012 aa18.6■□□□□ 0.57
UBE3D-201ENST00000237186 OSBPL5Q9H0X9 879 aaPredicted RBP18.6■□□□□ 0.57
UBE3D-201ENST00000237186 AATFQ9NY61 560 aaKnown RBP eCLIP18.6■□□□□ 0.57
UBE3D-201ENST00000237186 GRAPQ13588 217 aa18.59■□□□□ 0.57
UBE3D-201ENST00000237186 C15orf52Q6ZUT6 534 aaKnown RBP18.59■□□□□ 0.57
UBE3D-201ENST00000237186 TXNRD3Q86VQ6 643 aa18.59■□□□□ 0.57
UBE3D-201ENST00000237186 METTL16Q86W50 562 aaKnown RBP18.59■□□□□ 0.57
UBE3D-201ENST00000237186 GRAPLQ8TC17 118 aaPredicted RBP18.59■□□□□ 0.57
UBE3D-201ENST00000237186 SHISA4Q96DD7 197 aa18.59■□□□□ 0.57
UBE3D-201ENST00000237186 ECM29Q5VYK3 1845 aa18.59■□□□□ 0.57
UBE3D-201ENST00000237186 TAF1P21675 1872 aa18.59■□□□□ 0.57
UBE3D-201ENST00000237186 BIN1O00499 593 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 PRDM1O75626 825 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 RFC4P35249 363 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 TMTC3Q6ZXV5 915 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 CNNM3Q8NE01 707 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 WDR66Q8TBY9 1149 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 OXER1Q8TDS5 423 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 FAM13BQ9NYF5 915 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.57
UBE3D-201ENST00000237186 PCDHB6Q9Y5E3 794 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 LY75O60449 1722 aa18.58■□□□□ 0.57
UBE3D-201ENST00000237186 GSDMDP57764 484 aa18.58■□□□□ 0.56
UBE3D-201ENST00000237186 CHAF1AQ13111 956 aaPredicted RBP18.58■□□□□ 0.56
UBE3D-201ENST00000237186 DHX8Q14562 1220 aaKnown RBP18.58■□□□□ 0.56
UBE3D-201ENST00000237186 NT5DC1Q5TFE4 455 aa18.58■□□□□ 0.56
UBE3D-201ENST00000237186 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
UBE3D-201ENST00000237186 CCDC24Q8N4L8 307 aa18.58■□□□□ 0.56
UBE3D-201ENST00000237186 HOOK1Q9UJC3 728 aaKnown RBP18.58■□□□□ 0.56
UBE3D-201ENST00000237186 MYO1BO43795 1136 aa18.57■□□□□ 0.56
UBE3D-201ENST00000237186 ADRA2BP18089 450 aa18.57■□□□□ 0.56
UBE3D-201ENST00000237186 PDE4BQ07343 736 aa18.57■□□□□ 0.56
UBE3D-201ENST00000237186 NFIXQ14938 502 aa18.57■□□□□ 0.56
UBE3D-201ENST00000237186 FBXW7Q969H0 707 aa18.57■□□□□ 0.56
UBE3D-201ENST00000237186 CABP5Q9NP86 173 aa18.57■□□□□ 0.56
UBE3D-201ENST00000237186 KCND1Q9NSA2 647 aa18.57■□□□□ 0.56
UBE3D-201ENST00000237186 V9GY48 417 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-201ENST00000237186 PLEKHA8P1O95397 391 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 KRT2P35908 639 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 PNOCQ13519 176 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 KRT27Q7Z3Y8 459 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 TAOK2Q9UL54 1235 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 CASZ1Q86V15 1759 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 BMP15O95972 392 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 PPP4CP60510 307 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 FAM196AQ6ZSG2 479 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 ANKS1AQ92625 1134 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 HSD3B7Q9H2F3 369 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 VPS54Q9P1Q0 977 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 PCDHA5Q9Y5H7 936 aa18.56■□□□□ 0.56
UBE3D-201ENST00000237186 XDHP47989 1333 aa18.55■□□□□ 0.56
UBE3D-201ENST00000237186 SARSP49591 514 aaKnown RBP18.55■□□□□ 0.56
UBE3D-201ENST00000237186 KANK3Q6NY19 840 aa18.55■□□□□ 0.56
UBE3D-201ENST00000237186 TNFRSF25Q93038 417 aa18.55■□□□□ 0.56
UBE3D-201ENST00000237186 TRIM75PA6NK02 468 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 MYL5Q02045 173 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 GRIN1Q05586 938 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 NPY5RQ15761 445 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 C12orf60Q5U649 245 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 DZIP1Q86YF9 867 aaKnown RBP18.54■□□□□ 0.56
UBE3D-201ENST00000237186 CTCFLQ8NI51 663 aaPredicted RBP18.54■□□□□ 0.56
UBE3D-201ENST00000237186 XPO4Q9C0E2 1151 aaKnown RBP18.54■□□□□ 0.56
UBE3D-201ENST00000237186 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 CNTNAP5Q8WYK1 1306 aa18.54■□□□□ 0.56
UBE3D-201ENST00000237186 LDHBP07195 334 aaKnown RBP18.54■□□□□ 0.56
UBE3D-201ENST00000237186 GSTO1P78417 241 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms