RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ZNF771Q7L3S4 317 aaPredicted RBP23.67■■□□□ 1.38
SNX3-201ENST00000230085 ZNRF3Q9ULT6 936 aa23.67■■□□□ 1.38
SNX3-201ENST00000230085 NLRP12P59046 1061 aa23.66■■□□□ 1.38
SNX3-201ENST00000230085 BMS1Q14692 1282 aaKnown RBP23.66■■□□□ 1.38
SNX3-201ENST00000230085 FILIP1Q7Z7B0 1213 aa23.66■■□□□ 1.38
SNX3-201ENST00000230085 PPP1R13BQ96KQ4 1090 aa23.66■■□□□ 1.38
SNX3-201ENST00000230085 IQSEC3Q9UPP2 1182 aaPredicted RBP23.66■■□□□ 1.38
SNX3-201ENST00000230085 FZD9O00144 591 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 PHKA1P46020 1223 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 FGD1P98174 961 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 CCDC102BQ68D86 513 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 PODNQ7Z5L7 613 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 ZNF592Q92610 1267 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 ARAP2Q8WZ64 1704 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 FAM237AA0A1B0GTK4 181 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 E7EWF7 191 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 ATP8B1O43520 1251 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 GORABQ5T7V8 394 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 SCN9AQ15858 1988 aa23.65■■□□□ 1.38
SNX3-201ENST00000230085 FDPSP14324 419 aaKnown RBP23.64■■□□□ 1.37
SNX3-201ENST00000230085 IL1R1P14778 569 aa23.64■■□□□ 1.37
SNX3-201ENST00000230085 SFPQP23246 707 aaKnown RBP eCLIP23.64■■□□□ 1.37
SNX3-201ENST00000230085 APOBRQ0VD83 1088 aa23.64■■□□□ 1.37
SNX3-201ENST00000230085 NCAPHQ15003 741 aa23.64■■□□□ 1.37
SNX3-201ENST00000230085 ELF2Q15723 593 aa23.64■■□□□ 1.37
SNX3-201ENST00000230085 ARMCX5Q6P1M9 558 aa23.64■■□□□ 1.37
SNX3-201ENST00000230085 CCDC129Q6ZRS4 1044 aa23.64■■□□□ 1.37
SNX3-201ENST00000230085 SEC62Q99442 399 aaKnown RBP23.64■■□□□ 1.37
SNX3-201ENST00000230085 DHX16O60231 1041 aaKnown RBP23.63■■□□□ 1.37
SNX3-201ENST00000230085 RAD17O75943 681 aa23.63■■□□□ 1.37
SNX3-201ENST00000230085 FTOQ9C0B1 505 aaKnown RBP eCLIP23.63■■□□□ 1.37
SNX3-201ENST00000230085 TIAM2Q8IVF5 1701 aa23.63■■□□□ 1.37
SNX3-201ENST00000230085 CMA1P23946 247 aa23.63■■□□□ 1.37
SNX3-201ENST00000230085 SDF4Q9BRK5 362 aa23.63■■□□□ 1.37
SNX3-201ENST00000230085 TMX1Q9H3N1 280 aa23.63■■□□□ 1.37
SNX3-201ENST00000230085 PAG1Q9NWQ8 432 aa23.63■■□□□ 1.37
SNX3-201ENST00000230085 HSPD1P10809 573 aaKnown RBP23.62■■□□□ 1.37
SNX3-201ENST00000230085 ETF1P62495 437 aaKnown RBP23.62■■□□□ 1.37
SNX3-201ENST00000230085 CXCL9Q07325 125 aa23.62■■□□□ 1.37
SNX3-201ENST00000230085 ELOA2Q8IYF1 753 aaPredicted RBP23.62■■□□□ 1.37
SNX3-201ENST00000230085 XPO4Q9C0E2 1151 aaKnown RBP23.62■■□□□ 1.37
SNX3-201ENST00000230085 ZNF446Q9NWS9 450 aa23.62■■□□□ 1.37
SNX3-201ENST00000230085 TUBE1Q9UJT0 475 aa23.62■■□□□ 1.37
SNX3-201ENST00000230085 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.62■■□□□ 1.37
SNX3-201ENST00000230085 ZNF541Q9H0D2 1346 aa23.61■■□□□ 1.37
SNX3-201ENST00000230085 TPM1P09493 284 aa23.61■■□□□ 1.37
SNX3-201ENST00000230085 CEBPZQ03701 1054 aaKnown RBP23.61■■□□□ 1.37
SNX3-201ENST00000230085 FBXO18Q8NFZ0 1043 aa23.61■■□□□ 1.37
SNX3-201ENST00000230085 JAG2Q9Y219 1238 aa23.61■■□□□ 1.37
SNX3-201ENST00000230085 NDUFA8P51970 172 aa23.6■■□□□ 1.37
SNX3-201ENST00000230085 EIF6P56537 245 aaKnown RBP23.6■■□□□ 1.37
SNX3-201ENST00000230085 LRRFIP1Q32MZ4 808 aaKnown RBP23.6■■□□□ 1.37
SNX3-201ENST00000230085 DPCR1Q3MIW9 517 aa23.6■■□□□ 1.37
SNX3-201ENST00000230085 CCDC158Q5M9N0 1113 aa23.6■■□□□ 1.37
SNX3-201ENST00000230085 GTF2IP78347 998 aa23.6■■□□□ 1.37
SNX3-201ENST00000230085 AXDND1Q5T1B0 1012 aaPredicted RBP23.6■■□□□ 1.37
SNX3-201ENST00000230085 DNAJC2Q99543 621 aaKnown RBP23.6■■□□□ 1.37
SNX3-201ENST00000230085 MYH7P12883 1935 aa23.59■■□□□ 1.37
SNX3-201ENST00000230085 SPTLC2O15270 562 aa23.59■■□□□ 1.37
SNX3-201ENST00000230085 CBFA2T2O43439 604 aa23.59■■□□□ 1.37
SNX3-201ENST00000230085 ZRANB2O95218 330 aaKnown RBP eCLIP23.59■■□□□ 1.37
SNX3-201ENST00000230085 SLC3A2P08195 630 aaKnown RBP23.59■■□□□ 1.37
SNX3-201ENST00000230085 ZRSR1Q15695 479 aaKnown RBP23.59■■□□□ 1.37
SNX3-201ENST00000230085 MYSM1Q5VVJ2 828 aa23.59■■□□□ 1.37
SNX3-201ENST00000230085 TTLL5Q6EMB2 1281 aa23.59■■□□□ 1.37
SNX3-201ENST00000230085 FBXW7Q969H0 707 aa23.59■■□□□ 1.37
SNX3-201ENST00000230085 GNL3LQ9NVN8 582 aaKnown RBP23.59■■□□□ 1.37
SNX3-201ENST00000230085 TRMT1Q9NXH9 659 aaKnown RBP23.59■■□□□ 1.37
SNX3-201ENST00000230085 MAST3O60307 1309 aa23.58■■□□□ 1.37
SNX3-201ENST00000230085 PSMD14O00487 310 aa23.58■■□□□ 1.37
SNX3-201ENST00000230085 RNF113AO15541 343 aaKnown RBP23.58■■□□□ 1.37
SNX3-201ENST00000230085 STK38Q15208 465 aa23.58■■□□□ 1.37
SNX3-201ENST00000230085 TTC39AQ5SRH9 613 aa23.58■■□□□ 1.37
SNX3-201ENST00000230085 CIAPIN1Q6FI81 312 aa23.58■■□□□ 1.37
SNX3-201ENST00000230085 LRRC2Q9BYS8 371 aa23.58■■□□□ 1.37
SNX3-201ENST00000230085 IFNKQ9P0W0 207 aa23.58■■□□□ 1.37
SNX3-201ENST00000230085 FHOD1Q9Y613 1164 aa23.58■■□□□ 1.37
SNX3-201ENST00000230085 ZC3H4Q9UPT8 1303 aaKnown RBP23.58■■□□□ 1.36
SNX3-201ENST00000230085 USP17L3A6NCW0 530 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 USP17L4A6NCW7 530 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 RASGRF1Q13972 1273 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 SCARF1Q14162 830 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 USP17L1Q7RTZ2 530 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 GJA3Q9Y6H8 435 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 DDNO94850 711 aaPredicted RBP23.57■■□□□ 1.36
SNX3-201ENST00000230085 ZFYP08048 801 aaPredicted RBP23.57■■□□□ 1.36
SNX3-201ENST00000230085 ARID4AP29374 1257 aaPredicted RBP23.57■■□□□ 1.36
SNX3-201ENST00000230085 PI16Q6UXB8 463 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 TMC6Q7Z403 805 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 MXD3Q9BW11 206 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 HPSEQ9Y251 543 aa23.57■■□□□ 1.36
SNX3-201ENST00000230085 ZNF202O95125 648 aa23.56■■□□□ 1.36
SNX3-201ENST00000230085 MCAMP43121 646 aa23.56■■□□□ 1.36
SNX3-201ENST00000230085 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
SNX3-201ENST00000230085 C8orf76Q96K31 380 aa23.56■■□□□ 1.36
SNX3-201ENST00000230085 UBXN6Q9BZV1 441 aa23.56■■□□□ 1.36
SNX3-201ENST00000230085 HSD3B7Q9H2F3 369 aa23.56■■□□□ 1.36
SNX3-201ENST00000230085 ARGLU1Q9NWB6 273 aaPredicted RBP23.56■■□□□ 1.36
SNX3-201ENST00000230085 ZBTB12Q9Y330 459 aaPredicted RBP23.56■■□□□ 1.36
SNX3-201ENST00000230085 COL1A1P02452 1464 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms