RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 IARSP41252 1262 aaKnown RBP10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 NKX1-1Q15270 411 aaPredicted RBP10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 ZKSCAN3Q9BRR0 538 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 SLC26A6Q9BXS9 759 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 L2HGDHQ9H9P8 463 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 ZSWIM5Q9P217 1185 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 CHD4Q14839 1912 aa10.76□□□□□ -0.69
HLA-DOA-201ENST00000229829 PSDA5PKW4 1024 aaPredicted RBP10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 ZBTB43O43298 467 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 PDE6AP16499 860 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 TRIM28Q13263 835 aaKnown RBP10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 CCDC93Q567U6 631 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 LY9Q9HBG7 655 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 KCNJ14Q9UNX9 436 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 BTBD18B2RXH4 712 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 PPP6R2O75170 966 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 MYL5Q02045 173 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 TMEM67Q5HYA8 995 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 RESP18Q5W5W9 173 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 KIF6Q6ZMV9 814 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 VGLL2Q8N8G2 317 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 CCDC102AQ96A19 550 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 PLA2G12BQ9BX93 195 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 EPB41L4AQ9HCS5 686 aaPredicted RBP10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 INTS13Q9NVM9 706 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 TMOD3Q9NYL9 352 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 GOLGA8AA7E2F4 631 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 ZNF827Q17R98 1081 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 NLRP10Q86W26 655 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 CNNM3Q8NE01 707 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 ZNF526Q8TF50 670 aaPredicted RBP10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 PIGBQ92521 554 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 STRBPQ96SI9 672 aaKnown RBP10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 KCNH3Q9ULD8 1083 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 PAPPA2Q9BXP8 1791 aa10.75□□□□□ -0.69
HLA-DOA-201ENST00000229829 TCRBV5S4A2TA0A5A2 114 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 TOB1P50616 345 aaPredicted RBP10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 TRIM65Q6PJ69 517 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 GRAMD1CQ8IYS0 662 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 WDR19Q8NEZ3 1342 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 KIF2AO00139 706 aaPredicted RBP10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 PRKAB2O43741 272 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 PDE8BO95263 885 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 MNAT1P51948 309 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 MICALL1Q8N3F8 863 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 AIDAQ96BJ3 306 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 ANKRD18BA2A2Z9 1011 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 IRS4O14654 1257 aaPredicted RBP10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 ATP2B1P20020 1258 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 ETF1P62495 437 aaKnown RBP10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 DHX8Q14562 1220 aaKnown RBP10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 UBE3CQ15386 1083 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 RRP12Q5JTH9 1297 aaKnown RBP10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 CNPY4Q8N129 248 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 ARMT1Q9H993 441 aa10.74□□□□□ -0.69
HLA-DOA-201ENST00000229829 IFIT3O14879 490 aaKnown RBP10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 CTSWP56202 376 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 VSTM4Q8IW00 320 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 REXO1L1PQ8IX06 675 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 TRMT44Q8IYL2 757 aaKnown RBP10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 PDILTQ8N807 584 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 TRMT112Q9UI30 125 aaKnown RBP10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 MAP3K15Q6ZN16 1313 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 CDKL5O76039 1030 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 FMR1Q06787 632 aaKnown RBP eCLIP10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 NR5A1Q13285 461 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 FOXR1Q6PIV2 292 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 CPLX2Q6PUV4 134 aaKnown RBP10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 USP49Q70CQ1 688 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 IFNL3Q8IZI9 196 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 MAGEB6Q8N7X4 407 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 JMYQ8N9B5 988 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 SLC4A9Q96Q91 983 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 FAM53CQ9NYF3 392 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 SLC12A7Q9Y666 1083 aa10.73□□□□□ -0.69
HLA-DOA-201ENST00000229829 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 SMIM22K7EJ46 135 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 MBD4O95243 580 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 TOP1P11387 765 aaKnown RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 MDM2Q00987 491 aaPredicted RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 TRIM29Q14134 588 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 SRLQ86TD4 932 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 ARFGAP3Q9NP61 516 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 SEC31BQ9NQW1 1179 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 RNF216Q9NWF9 866 aaPredicted RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 TBC1D2BQ9UPU7 963 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 FAM237AA0A1B0GTK4 181 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 UBAP1LF5GYI3 381 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 H2AFXP16104 143 aaPredicted RBP10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 OLFM4Q6UX06 510 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 TMEM139Q8IV31 216 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 TMEM87BQ96K49 555 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 MED15Q96RN5 788 aa10.72□□□□□ -0.69
HLA-DOA-201ENST00000229829 SPATA31A1Q5TZJ5 1347 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms