RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 IFIH1Q9BYX4 1025 aaKnown RBP15.39■□□□□ 0.05
HCFC2-201ENST00000229330 TRIM31Q9BZY9 425 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 PLEKHA4Q9H4M7 779 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 RNMTO43148 476 aaKnown RBP15.39■□□□□ 0.05
HCFC2-201ENST00000229330 CTNNA1P35221 906 aaKnown RBP15.39■□□□□ 0.05
HCFC2-201ENST00000229330 PLCD1P51178 756 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 RBBP5Q15291 538 aaKnown RBP15.39■□□□□ 0.05
HCFC2-201ENST00000229330 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 ACSBG1Q96GR2 724 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 ADAM21Q9UKJ8 722 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 SAMD9LQ8IVG5 1584 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 YEATS2Q9ULM3 1422 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 SF3A3Q12874 501 aaKnown RBP eCLIP15.38■□□□□ 0.05
HCFC2-201ENST00000229330 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 DCAF5Q96JK2 942 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 OSBPL3Q9H4L5 887 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 FPGT-TNNI3KV9GXZ4 949 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 ZFYVE16Q7Z3T8 1539 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 GNAT2P19087 354 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 FYB2Q5VWT5 728 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 CRNKL1Q9BZJ0 848 aaKnown RBP15.38■□□□□ 0.05
HCFC2-201ENST00000229330 STK38LQ9Y2H1 464 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 TMEM2Q9UHN6 1383 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 ARHGEF2Q92974 986 aaKnown RBP15.38■□□□□ 0.05
HCFC2-201ENST00000229330 ORAI2Q96SN7 254 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 HYOU1Q9Y4L1 999 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 SLC35F6Q8N357 371 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 LSG1Q9H089 658 aaKnown RBP15.38■□□□□ 0.05
HCFC2-201ENST00000229330 SAMM50Q9Y512 469 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 A0A1W2PQ27 194 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 A0A1W2PQ64 194 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 A0A1W2PQD8 194 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 PFKFB2O60825 505 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 HIP1RO75146 1068 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 NAPAP54920 295 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 TBC1D31Q96DN5 1066 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 STX8Q9UNK0 236 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 KDM6BO15054 1643 aa15.38■□□□□ 0.05
HCFC2-201ENST00000229330 LUC7L3O95232 432 aaKnown RBP15.37■□□□□ 0.05
HCFC2-201ENST00000229330 NBPF14Q5TI25 921 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.37■□□□□ 0.05
HCFC2-201ENST00000229330 TOM1O60784 492 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 SETSIPP0DME0 302 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 IFT88Q13099 833 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 BEND3Q5T5X7 828 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 ATP6V0A2Q9Y487 856 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 KDM5CP41229 1560 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 IKBKBO14920 756 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 ZSCAN20P17040 1043 aaPredicted RBP15.37■□□□□ 0.05
HCFC2-201ENST00000229330 RPS6KA1Q15418 735 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 CCDC170Q8IYT3 715 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 B4E1Z4 1266 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 PPP2R5AQ15172 486 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 RASEFQ8IZ41 740 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 MCUR1Q96AQ8 359 aa15.37■□□□□ 0.05
HCFC2-201ENST00000229330 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
HCFC2-201ENST00000229330 TRAF5O00463 557 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 KIF3CO14782 793 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 CLTAP09496 248 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 CNNM4Q6P4Q7 775 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 TRIML1Q8N9V2 468 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 C6orf50Q9HD87 102 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 TMOD2Q9NZR1 351 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 MYO1AQ9UBC5 1043 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 NAA30Q147X3 362 aaPredicted RBP15.36■□□□□ 0.05
HCFC2-201ENST00000229330 ASIC2Q16515 512 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 DDB1Q16531 1140 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 TADA2BQ86TJ2 420 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 SREK1Q8WXA9 508 aaKnown RBP15.36■□□□□ 0.05
HCFC2-201ENST00000229330 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 RPSAP08865 295 aaKnown RBP15.36■□□□□ 0.05
HCFC2-201ENST00000229330 DPCR1Q3MIW9 517 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 SV2BQ7L1I2 683 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 EIF3CLB5ME19 914 aaKnown RBP15.36■□□□□ 0.05
HCFC2-201ENST00000229330 ZNF131P52739 623 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 GYS2P54840 703 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 CASP8Q14790 479 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 TRIM68Q6AZZ1 485 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 KBTBD3Q8NAB2 608 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 GBP5Q96PP8 586 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 EIF3CQ99613 913 aaKnown RBP15.36■□□□□ 0.05
HCFC2-201ENST00000229330 DBNDD2Q9BQY9 259 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 TCP1P17987 556 aaKnown RBP15.36■□□□□ 0.05
HCFC2-201ENST00000229330 CCDC152Q4G0S7 254 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 IQCDQ96DY2 449 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 RAB3IPQ96QF0 476 aaPredicted RBP15.36■□□□□ 0.05
HCFC2-201ENST00000229330 STAP2Q9UGK3 403 aa15.36■□□□□ 0.05
HCFC2-201ENST00000229330 GOLGA8FQ08AF8 430 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 GOLGA8DPQ0D2H9 430 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 DDX21Q9NR30 783 aaKnown RBP eCLIP15.35■□□□□ 0.05
HCFC2-201ENST00000229330 KIAA0232Q92628 1395 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 UBAP1LF5GYI3 381 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 CCDC174Q6PII3 467 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 SSH3Q8TE77 659 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 E7EWF7 191 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 TYW1BQ6NUM6 668 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 PAF1Q8N7H5 531 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 N4BP2L2Q92802 583 aaPredicted RBP15.35■□□□□ 0.05
HCFC2-201ENST00000229330 PHKBQ93100 1093 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 RFC4P35249 363 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms