RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 MLKLQ8NB16 471 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 OXER1Q8TDS5 423 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 UBAC1Q9BSL1 405 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 DACH1Q9UI36 760 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 CEP131Q9UPN4 1083 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 COL22A1Q8NFW1 1626 aaPredicted RBP18.64■□□□□ 0.57
LTBR-201ENST00000228918 COL4A1P02462 1669 aa18.64■□□□□ 0.57
LTBR-201ENST00000228918 CHRNDQ07001 517 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 TBX2Q13207 712 aaPredicted RBP18.63■□□□□ 0.57
LTBR-201ENST00000228918 SEC23AQ15436 765 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 PTPN21Q16825 1174 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 TRIM65Q6PJ69 517 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 ADGRA1Q86SQ6 560 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 TRIML1Q8N9V2 468 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 SMARCE1Q969G3 411 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 NOL10Q9BSC4 688 aaKnown RBP18.63■□□□□ 0.57
LTBR-201ENST00000228918 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.63■□□□□ 0.57
LTBR-201ENST00000228918 MYH2Q9UKX2 1941 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 ACTN4O43707 911 aaKnown RBP18.63■□□□□ 0.57
LTBR-201ENST00000228918 CAMTA2O94983 1202 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 NTSR2O95665 410 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 REXO1L1PQ8IX06 675 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 LRRN4CLQ8ND94 238 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 ENOX1Q8TC92 643 aaKnown RBP18.63■□□□□ 0.57
LTBR-201ENST00000228918 RNF26Q9BY78 433 aaPredicted RBP18.63■□□□□ 0.57
LTBR-201ENST00000228918 ANAPC4Q9UJX5 808 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 NFE2L3Q9Y4A8 694 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 DUOX1Q9NRD9 1551 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 TNKSO95271 1327 aa18.63■□□□□ 0.57
LTBR-201ENST00000228918 COL16A1Q07092 1604 aaPredicted RBP18.63■□□□□ 0.57
LTBR-201ENST00000228918 CACNA1SQ13698 1873 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 ARHGAP6O43182 974 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 CYP7A1P22680 504 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 SDR42E1Q8WUS8 393 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 SHISA4Q96DD7 197 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 DNAI1Q9UI46 699 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
LTBR-201ENST00000228918 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
LTBR-201ENST00000228918 ZNF827Q17R98 1081 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 KANK3Q6NY19 840 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 GRAMD1CQ8IYS0 662 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 ZNF804BA4D1E1 1349 aa18.62■□□□□ 0.57
LTBR-201ENST00000228918 PPP2R5BQ15173 497 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 ERCC6LQ2NKX8 1250 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 HSP90AA4PQ58FG1 418 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 SPATA20Q8TB22 786 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 ESR2Q92731 530 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 CSRNP2Q9H175 543 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 CABP5Q9NP86 173 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 DLEC1Q9Y238 1755 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 BAZ2AQ9UIF9 1905 aaKnown RBP18.61■□□□□ 0.57
LTBR-201ENST00000228918 MINDY4BA8MYZ0 360 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 FANCGO15287 622 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 H2AFXP16104 143 aaPredicted RBP18.61■□□□□ 0.57
LTBR-201ENST00000228918 USP49Q70CQ1 688 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 PDILTQ8N807 584 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 FAM53CQ9NYF3 392 aa18.61■□□□□ 0.57
LTBR-201ENST00000228918 COL1A1P02452 1464 aaPredicted RBP18.6■□□□□ 0.57
LTBR-201ENST00000228918 ZSCAN12O43309 604 aa18.6■□□□□ 0.57
LTBR-201ENST00000228918 TRMT44Q8IYL2 757 aaKnown RBP18.6■□□□□ 0.57
LTBR-201ENST00000228918 MED15Q96RN5 788 aa18.6■□□□□ 0.57
LTBR-201ENST00000228918 IQSEC3Q9UPP2 1182 aaPredicted RBP18.6■□□□□ 0.57
LTBR-201ENST00000228918 MAGEB6P1A0A0J9YX57 407 aa18.6■□□□□ 0.57
LTBR-201ENST00000228918 ATP2B1P20020 1258 aa18.6■□□□□ 0.57
LTBR-201ENST00000228918 PKN1Q16512 942 aa18.6■□□□□ 0.57
LTBR-201ENST00000228918 AATFQ9NY61 560 aaKnown RBP eCLIP18.6■□□□□ 0.57
LTBR-201ENST00000228918 NIP7Q9Y221 180 aaKnown RBP eCLIP18.6■□□□□ 0.57
LTBR-201ENST00000228918 SCN7AQ01118 1682 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 VWA3AA6NCI4 1184 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 FAM205CA6NFA0 338 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 SMIM22K7EJ46 135 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 ATP6V1AP38606 617 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 PLCD1P51178 756 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 GABPB1Q06547 395 aaPredicted RBP18.59■□□□□ 0.57
LTBR-201ENST00000228918 FUT2Q10981 343 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 SPECC1LQ69YQ0 1117 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 NUTM2AQ8IVF1 878 aaPredicted RBP18.59■□□□□ 0.57
LTBR-201ENST00000228918 KRT222Q8N1A0 295 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 ENAHQ8N8S7 591 aaPredicted RBP18.59■□□□□ 0.57
LTBR-201ENST00000228918 TC2NQ8N9U0 490 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 RIOK1Q9BRS2 568 aaKnown RBP18.59■□□□□ 0.57
LTBR-201ENST00000228918 PPP2R2CQ9Y2T4 447 aa18.59■□□□□ 0.57
LTBR-201ENST00000228918 TRIM75PA6NK02 468 aa18.58■□□□□ 0.57
LTBR-201ENST00000228918 NPHP1O15259 732 aa18.58■□□□□ 0.57
LTBR-201ENST00000228918 CDK11BP21127 795 aaKnown RBP18.58■□□□□ 0.57
LTBR-201ENST00000228918 AKAP17AQ02040 695 aaKnown RBP18.58■□□□□ 0.57
LTBR-201ENST00000228918 TAF3Q5VWG9 929 aa18.58■□□□□ 0.57
LTBR-201ENST00000228918 BAG1Q99933 345 aaPredicted RBP18.58■□□□□ 0.57
LTBR-201ENST00000228918 PHF20Q9BVI0 1012 aa18.58■□□□□ 0.57
LTBR-201ENST00000228918 ZNF446Q9NWS9 450 aa18.58■□□□□ 0.57
LTBR-201ENST00000228918 RAI14Q9P0K7 980 aa18.58■□□□□ 0.57
LTBR-201ENST00000228918 VPS54Q9P1Q0 977 aa18.58■□□□□ 0.57
LTBR-201ENST00000228918 ABCF2Q9UG63 623 aa18.58■□□□□ 0.57
LTBR-201ENST00000228918 STX10O60499 249 aa18.58■□□□□ 0.56
LTBR-201ENST00000228918 XBP1P17861 261 aa18.58■□□□□ 0.56
LTBR-201ENST00000228918 ERCC5P28715 1186 aaPredicted RBP18.58■□□□□ 0.56
LTBR-201ENST00000228918 CASZ1Q86V15 1759 aa18.58■□□□□ 0.56
LTBR-201ENST00000228918 ZSCAN10Q96SZ4 725 aaPredicted RBP18.58■□□□□ 0.56
LTBR-201ENST00000228918 KRT2P35908 639 aa18.57■□□□□ 0.56
LTBR-201ENST00000228918 CDC5LQ99459 802 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms