RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
SEC61B-201ENST00000223641 NEK4P51957 841 aa16.57■□□□□ 0.24
SEC61B-201ENST00000223641 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
SEC61B-201ENST00000223641 PRAMEF18Q5VWM3 479 aa16.57■□□□□ 0.24
SEC61B-201ENST00000223641 MIGA2Q7L4E1 593 aa16.57■□□□□ 0.24
SEC61B-201ENST00000223641 NEDD1Q8NHV4 660 aa16.57■□□□□ 0.24
SEC61B-201ENST00000223641 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.57■□□□□ 0.24
SEC61B-201ENST00000223641 GLIS2Q9BZE0 524 aaPredicted RBP16.57■□□□□ 0.24
SEC61B-201ENST00000223641 TCP11L1Q9NUJ3 509 aa16.57■□□□□ 0.24
SEC61B-201ENST00000223641 ZNF112Q9UJU3 913 aa16.57■□□□□ 0.24
SEC61B-201ENST00000223641 PAPPA2Q9BXP8 1791 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 PRC1O43663 620 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 NOVP48745 357 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 TFAP4Q01664 338 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 RRP1BQ14684 758 aaKnown RBP16.56■□□□□ 0.24
SEC61B-201ENST00000223641 CERKLQ49MI3 558 aaPredicted RBP16.56■□□□□ 0.24
SEC61B-201ENST00000223641 FAM47AQ5JRC9 791 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 DCAF15Q66K64 600 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 MAP1SQ66K74 1059 aaPredicted RBP16.56■□□□□ 0.24
SEC61B-201ENST00000223641 DLK2Q6UY11 383 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 IGDCC4Q8TDY8 1250 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 CDCA5Q96FF9 252 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 TRIM34Q9BYJ4 488 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 TOMM22Q9NS69 142 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
SEC61B-201ENST00000223641 RBM19Q9Y4C8 960 aaKnown RBP16.56■□□□□ 0.24
SEC61B-201ENST00000223641 TSPY2A6NKD2 308 aa16.55■□□□□ 0.24
SEC61B-201ENST00000223641 KIF3CO14782 793 aa16.55■□□□□ 0.24
SEC61B-201ENST00000223641 AKR1B1P15121 316 aa16.55■□□□□ 0.24
SEC61B-201ENST00000223641 SEC23AQ15436 765 aa16.55■□□□□ 0.24
SEC61B-201ENST00000223641 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
SEC61B-201ENST00000223641 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
SEC61B-201ENST00000223641 IL17RBQ9NRM6 502 aa16.55■□□□□ 0.24
SEC61B-201ENST00000223641 PDRG1Q9NUG6 133 aa16.55■□□□□ 0.24
SEC61B-201ENST00000223641 ATAD5Q96QE3 1844 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 TSPY3P0CV98 308 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 TSPY8P0CW00 308 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 CAP2P40123 477 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 LIFRP42702 1097 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 EVCP57679 992 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 JAG1P78504 1218 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 TOB2Q14106 344 aaPredicted RBP16.54■□□□□ 0.24
SEC61B-201ENST00000223641 IQCA1Q86XH1 822 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 ANKS1AQ92625 1134 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 SNX21Q969T3 373 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 KLRG1Q96E93 195 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 TCEANC2Q96MN5 208 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 GINM1Q9NU53 330 aa16.54■□□□□ 0.24
SEC61B-201ENST00000223641 SH2B2O14492 632 aaPredicted RBP16.53■□□□□ 0.24
SEC61B-201ENST00000223641 ST18O60284 1047 aa16.53■□□□□ 0.24
SEC61B-201ENST00000223641 USP2O75604 605 aaPredicted RBP16.53■□□□□ 0.24
SEC61B-201ENST00000223641 CD2BP2O95400 341 aaKnown RBP16.53■□□□□ 0.24
SEC61B-201ENST00000223641 ITGBL1O95965 494 aaPredicted RBP16.53■□□□□ 0.24
SEC61B-201ENST00000223641 GUCY1A2P33402 732 aa16.53■□□□□ 0.24
SEC61B-201ENST00000223641 AK2P54819 239 aa16.53■□□□□ 0.24
SEC61B-201ENST00000223641 MAP3K11Q16584 847 aa16.53■□□□□ 0.24
SEC61B-201ENST00000223641 CCDC178Q5BJE1 867 aa16.53■□□□□ 0.24
SEC61B-201ENST00000223641 RCSD1Q6JBY9 416 aa16.53■□□□□ 0.24
SEC61B-201ENST00000223641 CHADLQ6NUI6 762 aa16.53■□□□□ 0.24
SEC61B-201ENST00000223641 Q6ZUG5 572 aa16.53■□□□□ 0.24
SEC61B-201ENST00000223641 ZSCAN10Q96SZ4 725 aaPredicted RBP16.53■□□□□ 0.24
SEC61B-201ENST00000223641 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
SEC61B-201ENST00000223641 ANGEL1Q9UNK9 670 aaKnown RBP16.53■□□□□ 0.24
SEC61B-201ENST00000223641 DOCK1Q14185 1865 aa16.52■□□□□ 0.24
SEC61B-201ENST00000223641 TNKSO95271 1327 aa16.52■□□□□ 0.24
SEC61B-201ENST00000223641 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.24
SEC61B-201ENST00000223641 SART3Q15020 963 aaKnown RBP16.52■□□□□ 0.24
SEC61B-201ENST00000223641 ABCB5Q2M3G0 1257 aa16.52■□□□□ 0.24
SEC61B-201ENST00000223641 TMEM179Q6ZVK1 233 aa16.52■□□□□ 0.24
SEC61B-201ENST00000223641 SGMS1Q86VZ5 419 aa16.52■□□□□ 0.24
SEC61B-201ENST00000223641 DGKHQ86XP1 1220 aa16.52■□□□□ 0.24
SEC61B-201ENST00000223641 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.24
SEC61B-201ENST00000223641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.52■□□□□ 0.243e-6■■■■□ 21.3
SEC61B-201ENST00000223641 ZKSCAN3Q9BRR0 538 aa16.52■□□□□ 0.24
SEC61B-201ENST00000223641 LY9Q9HBG7 655 aa16.52■□□□□ 0.24
SEC61B-201ENST00000223641 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.24
SEC61B-201ENST00000223641 IFIT3O14879 490 aaKnown RBP16.51■□□□□ 0.23
SEC61B-201ENST00000223641 PPP1R12BO60237 982 aaPredicted RBP16.51■□□□□ 0.23
SEC61B-201ENST00000223641 NMT2O60551 498 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 NF2P35240 595 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 MCM2P49736 904 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 ANKRD1Q15327 319 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 SHROOM1Q2M3G4 852 aaPredicted RBP16.51■□□□□ 0.23
SEC61B-201ENST00000223641 TMEM67Q5HYA8 995 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 CEP95Q96GE4 821 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 UBAC1Q9BSL1 405 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
SEC61B-201ENST00000223641 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 TRAF5O00463 557 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 GDF11O95390 407 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 GH2P01242 217 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 ASNSP08243 561 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 WTAPQ15007 396 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 NOL9Q5SY16 702 aaKnown RBP16.5■□□□□ 0.23
SEC61B-201ENST00000223641 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms