RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 M0QZ92 97 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 STAMBPO95630 424 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 DNM2P50570 870 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 CKAP4Q07065 602 aaKnown RBP20.68■□□□□ 0.9
CLIP2-201ENST00000223398 GRIPAP1Q4V328 841 aa20.68■□□□□ 0.9
CLIP2-201ENST00000223398 KRT19P08727 400 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 PAIP2Q9BPZ3 127 aaKnown RBP20.67■□□□□ 0.9
CLIP2-201ENST00000223398 MLXIPQ9HAP2 919 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 CTAGE15A4D2H0 777 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 KRT86O43790 486 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 CTAGE8P0CG41 777 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 CBX1P83916 185 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 ICA1Q05084 483 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 CTAGE6Q86UF2 777 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 CTAGE4Q8IX94 777 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 METTL13Q8N6R0 699 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 PPP1R9BQ96SB3 815 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 LLPHQ9BRT6 129 aaKnown RBP20.67■□□□□ 0.9
CLIP2-201ENST00000223398 GTPBP4Q9BZE4 634 aaKnown RBP20.67■□□□□ 0.9
CLIP2-201ENST00000223398 DSCC1Q9BVC3 393 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 ZMYM4Q5VZL5 1548 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 XDHP47989 1333 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 STX10O60499 249 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 GIGYF2Q6Y7W6 1299 aaKnown RBP20.67■□□□□ 0.9
CLIP2-201ENST00000223398 RNF169Q8NCN4 708 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 ZSCAN10Q96SZ4 725 aaPredicted RBP20.67■□□□□ 0.9
CLIP2-201ENST00000223398 EXOC7Q9UPT5 735 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 KDM5DQ9BY66 1539 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 FAM170AA1A519 330 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 RASAL2Q9UJF2 1139 aa20.67■□□□□ 0.9
CLIP2-201ENST00000223398 RAD17O75943 681 aa20.66■□□□□ 0.9
CLIP2-201ENST00000223398 FLOT1O75955 427 aa20.66■□□□□ 0.9
CLIP2-201ENST00000223398 TBC1D8BQ0IIM8 1120 aa20.66■□□□□ 0.9
CLIP2-201ENST00000223398 RNF187Q5TA31 235 aaPredicted RBP20.66■□□□□ 0.9
CLIP2-201ENST00000223398 ANKRD35Q8N283 1001 aa20.66■□□□□ 0.9
CLIP2-201ENST00000223398 SLC8A3P57103 927 aa20.66■□□□□ 0.9
CLIP2-201ENST00000223398 SSH3Q8TE77 659 aa20.66■□□□□ 0.9
CLIP2-201ENST00000223398 CALUO43852 315 aaPredicted RBP20.65■□□□□ 0.9
CLIP2-201ENST00000223398 GCNT3O95395 438 aa20.65■□□□□ 0.9
CLIP2-201ENST00000223398 MYL5Q02045 173 aa20.65■□□□□ 0.9
CLIP2-201ENST00000223398 KIF22Q14807 665 aa20.65■□□□□ 0.9
CLIP2-201ENST00000223398 SPICE1Q8N0Z3 855 aa20.65■□□□□ 0.9
CLIP2-201ENST00000223398 CSGALNACT2Q8N6G5 542 aa20.65■□□□□ 0.9
CLIP2-201ENST00000223398 BBXQ8WY36 941 aaPredicted RBP20.65■□□□□ 0.9
CLIP2-201ENST00000223398 GAS7O60861 476 aa20.65■□□□□ 0.9
CLIP2-201ENST00000223398 PDE8BO95263 885 aa20.65■□□□□ 0.9
CLIP2-201ENST00000223398 SPC25Q9HBM1 224 aa20.65■□□□□ 0.9
CLIP2-201ENST00000223398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.65■□□□□ 0.9
CLIP2-201ENST00000223398 CGNQ9P2M7 1197 aaKnown RBP20.65■□□□□ 0.9
CLIP2-201ENST00000223398 IQCGQ9H095 443 aaKnown RBP20.65■□□□□ 0.9
CLIP2-201ENST00000223398 KDM5AP29375 1690 aaKnown RBP20.64■□□□□ 0.9
CLIP2-201ENST00000223398 BRINP3Q76B58 766 aa20.64■□□□□ 0.9
CLIP2-201ENST00000223398 CABP7Q86V35 215 aa20.64■□□□□ 0.9
CLIP2-201ENST00000223398 CCDC155Q8N6L0 562 aa20.64■□□□□ 0.9
CLIP2-201ENST00000223398 ERBB4Q15303 1308 aa20.64■□□□□ 0.9
CLIP2-201ENST00000223398 PRR36Q9H6K5 1346 aa20.64■□□□□ 0.9
CLIP2-201ENST00000223398 ATL3Q6DD88 541 aa20.64■□□□□ 0.9
CLIP2-201ENST00000223398 MRPL44Q9H9J2 332 aaKnown RBP20.64■□□□□ 0.9
CLIP2-201ENST00000223398 TRPC6Q9Y210 931 aa20.64■□□□□ 0.9
CLIP2-201ENST00000223398 ERBB3P21860 1342 aa20.64■□□□□ 0.89
CLIP2-201ENST00000223398 CEP112Q8N8E3 955 aa20.64■□□□□ 0.89
CLIP2-201ENST00000223398 PIGBQ92521 554 aa20.64■□□□□ 0.89
CLIP2-201ENST00000223398 PTH1RQ03431 593 aa20.64■□□□□ 0.89
CLIP2-201ENST00000223398 PNMA1Q8ND90 353 aa20.64■□□□□ 0.89
CLIP2-201ENST00000223398 LEO1Q8WVC0 666 aaPredicted RBP20.64■□□□□ 0.89
CLIP2-201ENST00000223398 MAK16Q9BXY0 300 aaKnown RBP20.64■□□□□ 0.89
CLIP2-201ENST00000223398 BLZF1Q9H2G9 400 aa20.64■□□□□ 0.89
CLIP2-201ENST00000223398 CTAGE9A4FU28 777 aa20.64■□□□□ 0.89
CLIP2-201ENST00000223398 TMEM232C9JQI7 657 aa20.64■□□□□ 0.89
CLIP2-201ENST00000223398 CETN3O15182 167 aa20.64■□□□□ 0.89
CLIP2-201ENST00000223398 HSF2BPO75031 334 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 PRR16Q569H4 304 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 CDC37L1Q7L3B6 337 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 MIER3Q7Z3K6 550 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 GPKOWQ92917 476 aaPredicted RBP eCLIP20.63■□□□□ 0.89
CLIP2-201ENST00000223398 SLC5A4Q9NY91 659 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 RDH13Q8NBN7 331 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 CCDC114Q96M63 670 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 MYOM2P54296 1465 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 EXOC3O60645 756 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 TNFAIP3P21580 790 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 CDAN1Q8IWY9 1227 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 CSRNP1Q96S65 589 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 PSTPIP2Q9H939 334 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 TNKSO95271 1327 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 FERP16591 822 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 ABCB5Q2M3G0 1257 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 ZNF569Q5MCW4 686 aa20.63■□□□□ 0.89
CLIP2-201ENST00000223398 ABCC4O15439 1325 aa20.62■□□□□ 0.89
CLIP2-201ENST00000223398 KIFAP3Q92845 792 aa20.62■□□□□ 0.89
CLIP2-201ENST00000223398 CUTAO60888 179 aa20.62■□□□□ 0.89
CLIP2-201ENST00000223398 HSPD1P10809 573 aaKnown RBP20.62■□□□□ 0.89
CLIP2-201ENST00000223398 EP400NLQ6ZTU2 488 aa20.62■□□□□ 0.89
CLIP2-201ENST00000223398 USP6P35125 1406 aa20.62■□□□□ 0.89
CLIP2-201ENST00000223398 MKRN3Q13064 507 aaKnown RBP20.62■□□□□ 0.89
CLIP2-201ENST00000223398 PPP2R5BQ15173 497 aa20.62■□□□□ 0.89
CLIP2-201ENST00000223398 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
CLIP2-201ENST00000223398 KLRF2D3W0D1 207 aa20.62■□□□□ 0.89
CLIP2-201ENST00000223398 GNPTABQ3T906 1256 aa20.62■□□□□ 0.89
CLIP2-201ENST00000223398 CCDC63Q8NA47 563 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms