RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 STAG1Q8WVM7 1258 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 ZNF512BQ96KM6 892 aaPredicted RBP17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 GOLGA6L9A6NEM1 432 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 BAG3O95817 575 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 PPP2R5BQ15173 497 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 CDK5RAP3Q96JB5 506 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 PPP1R13BQ96KQ4 1090 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 C8orf37Q96NL8 207 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 PLIN2Q99541 437 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 NYXQ9GZU5 481 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 MAPK8IP1Q9UQF2 711 aa17.01■□□□□ 0.31
UBE2D4-201ENST00000222402 CCT6AP40227 531 aaKnown RBP17■□□□□ 0.31
UBE2D4-201ENST00000222402 STAT6P42226 847 aa17■□□□□ 0.31
UBE2D4-201ENST00000222402 EIF5P55010 431 aaKnown RBP17■□□□□ 0.31
UBE2D4-201ENST00000222402 UBE4AQ14139 1066 aa17■□□□□ 0.31
UBE2D4-201ENST00000222402 OXER1Q8TDS5 423 aa17■□□□□ 0.31
UBE2D4-201ENST00000222402 LZTFL1Q9NQ48 299 aa17■□□□□ 0.31
UBE2D4-201ENST00000222402 RFC4P35249 363 aa17■□□□□ 0.31
UBE2D4-201ENST00000222402 RNF26Q9BY78 433 aaPredicted RBP17■□□□□ 0.31
UBE2D4-201ENST00000222402 RGPD5Q99666 1765 aa16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 FEZ1Q99689 392 aa16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 MAN1B1Q9UKM7 699 aa16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 ARHGAP6O43182 974 aa16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 NCBP1Q09161 790 aaKnown RBP16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 SLC4A9Q96Q91 983 aa16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 BLZF1Q9H2G9 400 aa16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 MEX3CQ5U5Q3 659 aaKnown RBP16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 SPECC1LQ69YQ0 1117 aa16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 ANKRD2Q9GZV1 360 aa16.99■□□□□ 0.31
UBE2D4-201ENST00000222402 LDHBP07195 334 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 CALML3P27482 149 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 ETF1P62495 437 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 CCZ1BP86790 482 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 CCZ1P86791 482 aaPredicted RBP16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 ERCC6LQ2NKX8 1250 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 KRT222Q8N1A0 295 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 IGSF22Q8N9C0 903 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 CTAGE1Q96RT6 745 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 SEC63Q9UGP8 760 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 SYNRGQ9UMZ2 1314 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 TUBB4AP04350 444 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 GTF2F1P35269 517 aaKnown RBP eCLIP16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 FBXL16Q8N461 479 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 RPGRQ92834 1020 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 OSBPL5Q9H0X9 879 aaPredicted RBP16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 ZNF287Q9HBT7 754 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 CTNND2Q9UQB3 1225 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 RTCBQ9Y3I0 505 aaKnown RBP16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 PLEKHA8P1O95397 391 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 PTPREP23469 700 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 EPSTI1Q96J88 318 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 BPIFA3Q9BQP9 254 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 OGFRQ9NZT2 677 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 LMTK3Q96Q04 1460 aa16.98■□□□□ 0.31
UBE2D4-201ENST00000222402 PSDA5PKW4 1024 aaPredicted RBP16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 AKR1B15C9JRZ8 316 aaPredicted RBP16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 CCDC175P0C221 793 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 SMIM5Q71RC9 77 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 METTL16Q86W50 562 aaKnown RBP16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 SYMPKQ92797 1274 aaKnown RBP16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 CARD6Q9BX69 1037 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 ZNHIT6Q9NWK9 470 aaKnown RBP16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 STK36Q9NRP7 1315 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 TMEM232C9JQI7 657 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 LDHCP07864 332 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 TFAP4Q01664 338 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 GPS2Q13227 327 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 ARMCX5Q6P1M9 558 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 SMAP1Q8IYB5 467 aaPredicted RBP16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 FERMT2Q96AC1 680 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 VPS16Q9H269 839 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 SAP30BPQ9UHR5 308 aaKnown RBP16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 FOXP2O15409 715 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 PTGDRQ13258 359 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 DESI2Q9BSY9 194 aa16.97■□□□□ 0.31
UBE2D4-201ENST00000222402 SMYD4Q8IYR2 804 aaPredicted RBP16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 ZNF710Q8N1W2 664 aa16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 DPF2Q92785 391 aa16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 PYM1Q9BRP8 204 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 TCP11L1Q9NUJ3 509 aa16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 KCNQ2O43526 872 aa16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 COBLO75128 1261 aa16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 TRIM47Q96LD4 638 aa16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 SAMSN1Q9NSI8 373 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 SRPRBQ9Y5M8 271 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 C6orf229H3BNL8 230 aa16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 CASP1P29466 404 aa16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 BMS1Q14692 1282 aaKnown RBP16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 ENAHQ8N8S7 591 aaPredicted RBP16.96■□□□□ 0.31
UBE2D4-201ENST00000222402 GNAQP50148 359 aa16.96■□□□□ 0.3
UBE2D4-201ENST00000222402 VGLL2Q8N8G2 317 aa16.96■□□□□ 0.3
UBE2D4-201ENST00000222402 NBPF3Q9H094 633 aa16.96■□□□□ 0.3
UBE2D4-201ENST00000222402 SSBP05455 408 aaKnown RBP eCLIP16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 PRR29P0C7W0 189 aa16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 CELF1Q92879 486 aaKnown RBP16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 RMND1Q9NWS8 449 aa16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 FGFR2P21802 821 aa16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 GRIN1Q05586 938 aa16.95■□□□□ 0.3
UBE2D4-201ENST00000222402 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms