RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 FBXO2Q9UK22 296 aaPredicted RBP17.14■□□□□ 0.33
TRMT1-201ENST00000221504 VPS72Q15906 364 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 GLIPR1L2Q4G1C9 344 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 IFIT1BQ5T764 474 aaKnown RBP17.13■□□□□ 0.33
TRMT1-201ENST00000221504 CTR9Q6PD62 1173 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
TRMT1-201ENST00000221504 IQCA1Q86XH1 822 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
TRMT1-201ENST00000221504 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
TRMT1-201ENST00000221504 MECOMQ03112 1051 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 TPD52L1Q16890 204 aaPredicted RBP17.13■□□□□ 0.33
TRMT1-201ENST00000221504 CATIPQ7Z7H3 387 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 OXER1Q8TDS5 423 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 TSC1Q92574 1164 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 ANKRD2Q9GZV1 360 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 PCDHB6Q9Y5E3 794 aa17.13■□□□□ 0.33
TRMT1-201ENST00000221504 PRDM1O75626 825 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 TNNT1P13805 278 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 HIBADHP31937 336 aaKnown RBP17.12■□□□□ 0.33
TRMT1-201ENST00000221504 FUT2Q10981 343 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 SPECC1Q5M775 1068 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 HSD3B7Q9H2F3 369 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 CEP131Q9UPN4 1083 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 BTAF1O14981 1849 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 LAMB1P07942 1786 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 MAST2Q6P0Q8 1798 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 USP17L21D6R901 530 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 XBP1P17861 261 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
TRMT1-201ENST00000221504 MYL5Q02045 173 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 GRIN1Q05586 938 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 PKN1Q16512 942 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
TRMT1-201ENST00000221504 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
TRMT1-201ENST00000221504 RBM28Q9NW13 759 aaKnown RBP17.12■□□□□ 0.33
TRMT1-201ENST00000221504 GNPATO15228 680 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 ZPR1O75312 459 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 FOXP4Q8IVH2 680 aaPredicted RBP17.11■□□□□ 0.33
TRMT1-201ENST00000221504 CABP5Q9NP86 173 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 HOOK1Q9UJC3 728 aaKnown RBP17.11■□□□□ 0.33
TRMT1-201ENST00000221504 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRMT1-201ENST00000221504 PCDHA5Q9Y5H7 936 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 PRPF3O43395 683 aaKnown RBP17.11■□□□□ 0.33
TRMT1-201ENST00000221504 CALM1P0DP23 149 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 CALM2P0DP24 149 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 CALM3P0DP25 149 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 FANCCQ00597 558 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 MDM2Q00987 491 aaPredicted RBP17.11■□□□□ 0.33
TRMT1-201ENST00000221504 TROAPQ12815 778 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 TMC6Q7Z403 805 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 C8orf37Q96NL8 207 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 CRNKL1Q9BZJ0 848 aaKnown RBP17.11■□□□□ 0.33
TRMT1-201ENST00000221504 AATFQ9NY61 560 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRMT1-201ENST00000221504 VPS54Q9P1Q0 977 aa17.11■□□□□ 0.33
TRMT1-201ENST00000221504 SRPRBQ9Y5M8 271 aaKnown RBP17.11■□□□□ 0.33
TRMT1-201ENST00000221504 ORC4O43929 436 aa17.1■□□□□ 0.33
TRMT1-201ENST00000221504 DDAH1O94760 285 aa17.1■□□□□ 0.33
TRMT1-201ENST00000221504 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
TRMT1-201ENST00000221504 OLFM4Q6UX06 510 aa17.1■□□□□ 0.33
TRMT1-201ENST00000221504 TPTE2Q6XPS3 522 aa17.1■□□□□ 0.33
TRMT1-201ENST00000221504 NGLY1Q96IV0 654 aa17.1■□□□□ 0.33
TRMT1-201ENST00000221504 PHF20Q9BVI0 1012 aa17.1■□□□□ 0.33
TRMT1-201ENST00000221504 DCP1AQ9NPI6 582 aaPredicted RBP17.1■□□□□ 0.33
TRMT1-201ENST00000221504 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
TRMT1-201ENST00000221504 USP27XA6NNY8 438 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 FOXN1O15353 648 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 ATP1A3P13637 1013 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 PRDX5P30044 214 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 ZNF710Q8N1W2 664 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 CCDC24Q8N4L8 307 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 KCND1Q9NSA2 647 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 ATP8A2Q9NTI2 1148 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 MORC2Q9Y6X9 1032 aaPredicted RBP17.09■□□□□ 0.33
TRMT1-201ENST00000221504 POLR2DO15514 142 aaKnown RBP17.09■□□□□ 0.33
TRMT1-201ENST00000221504 KRT2P35908 639 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
TRMT1-201ENST00000221504 POSTNQ15063 836 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 TMED8Q6PL24 325 aaPredicted RBP17.09■□□□□ 0.33
TRMT1-201ENST00000221504 PAXBP1Q9Y5B6 917 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 V9GY48 417 aaPredicted RBP17.09■□□□□ 0.33
TRMT1-201ENST00000221504 NHSQ6T4R5 1651 aa17.09■□□□□ 0.33
TRMT1-201ENST00000221504 KIAA1551Q9HCM1 1747 aa17.08■□□□□ 0.33
TRMT1-201ENST00000221504 TRIM75PA6NK02 468 aa17.08■□□□□ 0.33
TRMT1-201ENST00000221504 CTIFO43310 598 aaKnown RBP17.08■□□□□ 0.33
TRMT1-201ENST00000221504 ATP2B1P20020 1258 aa17.08■□□□□ 0.33
TRMT1-201ENST00000221504 EVX2Q03828 476 aa17.08■□□□□ 0.33
TRMT1-201ENST00000221504 TMTC3Q6ZXV5 915 aa17.08■□□□□ 0.33
TRMT1-201ENST00000221504 RTCBQ9Y3I0 505 aaKnown RBP17.08■□□□□ 0.33
TRMT1-201ENST00000221504 hCG_1642624A0A1W2PR95 340 aa17.08■□□□□ 0.32
TRMT1-201ENST00000221504 MYO1BO43795 1136 aa17.08■□□□□ 0.32
TRMT1-201ENST00000221504 BMP6P22004 513 aa17.08■□□□□ 0.32
TRMT1-201ENST00000221504 TM4SF1P30408 202 aa17.08■□□□□ 0.32
TRMT1-201ENST00000221504 ARMCX5Q6P1M9 558 aa17.08■□□□□ 0.32
TRMT1-201ENST00000221504 NYAP1Q6ZVC0 841 aa17.08■□□□□ 0.32
TRMT1-201ENST00000221504 CCAR2Q8N163 923 aaKnown RBP17.08■□□□□ 0.32
TRMT1-201ENST00000221504 NOL10Q9BSC4 688 aaKnown RBP17.08■□□□□ 0.32
TRMT1-201ENST00000221504 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms