RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 FBXO15Q8NCQ5 510 aaPredicted RBP5.49□□□□□ -1.53
CDKN3-201ENST00000216414 FBRSQ9HAH7 460 aa5.49□□□□□ -1.53
CDKN3-201ENST00000216414 C19orf73Q9NVV2 129 aa5.49□□□□□ -1.53
CDKN3-201ENST00000216414 CNTNAP4Q9C0A0 1308 aa5.48□□□□□ -1.53
CDKN3-201ENST00000216414 TMEM253P0C7T8 217 aa5.48□□□□□ -1.53
CDKN3-201ENST00000216414 MAPK8P45983 427 aa5.48□□□□□ -1.53
CDKN3-201ENST00000216414 INPP5AQ14642 412 aa5.48□□□□□ -1.53
CDKN3-201ENST00000216414 PCNX4Q63HM2 1172 aa5.48□□□□□ -1.53
CDKN3-201ENST00000216414 LRFN4Q6PJG9 635 aa5.48□□□□□ -1.53
CDKN3-201ENST00000216414 PPM1HQ9ULR3 514 aa5.48□□□□□ -1.53
CDKN3-201ENST00000216414 TREHO43280 583 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 CBX7O95931 251 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 CELA3AP09093 270 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 ETF1P62495 437 aaKnown RBP5.47□□□□□ -1.53
CDKN3-201ENST00000216414 DSC3Q14574 896 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 CIAPIN1Q6FI81 312 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 RETREG2Q8NC44 543 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 XAGE3Q8WTP9 111 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 PLPPR2Q96GM1 343 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 ALPK1Q96QP1 1244 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 SRCIN1Q9C0H9 1055 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 SLAMF8Q9P0V8 285 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 CYP8B1Q9UNU6 501 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 CAPN6Q9Y6Q1 641 aa5.47□□□□□ -1.53
CDKN3-201ENST00000216414 NPIPB6E9PJ23 425 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 KRT1P04264 644 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 SLBPQ14493 270 aaKnown RBP eCLIP5.46□□□□□ -1.54
CDKN3-201ENST00000216414 NKG7Q16617 165 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 LETMD1Q6P1Q0 360 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 C22orf34Q6ZV56 151 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 HDXQ7Z353 690 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 TTC6Q86TZ1 520 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 MFSD2AQ8NA29 543 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 RIN3Q8TB24 985 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 ABHD4Q8TB40 342 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 UBE2FQ969M7 185 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 CCDC120Q96HB5 630 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 ARID3AQ99856 593 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 OSBPL7Q9BZF2 842 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 KCNK12Q9HB15 430 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 DCP1AQ9NPI6 582 aaPredicted RBP5.46□□□□□ -1.54
CDKN3-201ENST00000216414 ZSWIM5Q9P217 1185 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 ST14Q9Y5Y6 855 aa5.46□□□□□ -1.54
CDKN3-201ENST00000216414 RAC2P15153 192 aa5.45□□□□□ -1.54
CDKN3-201ENST00000216414 PTPN11Q06124 597 aaPredicted RBP5.45□□□□□ -1.54
CDKN3-201ENST00000216414 SCARA3Q6AZY7 606 aa5.45□□□□□ -1.54
CDKN3-201ENST00000216414 ZNF746Q6NUN9 644 aaPredicted RBP5.45□□□□□ -1.54
CDKN3-201ENST00000216414 SETDB2Q96T68 719 aa5.45□□□□□ -1.54
CDKN3-201ENST00000216414 WNT10AQ9GZT5 417 aa5.45□□□□□ -1.54
CDKN3-201ENST00000216414 EPB41L4BQ9H329 900 aa5.45□□□□□ -1.54
CDKN3-201ENST00000216414 TCAF2A6NFQ2 919 aa5.44□□□□□ -1.54
CDKN3-201ENST00000216414 RBAK-RBAKDNI3L0D1 243 aa5.44□□□□□ -1.54
CDKN3-201ENST00000216414 PDE4CQ08493 712 aa5.44□□□□□ -1.54
CDKN3-201ENST00000216414 KCNA10Q16322 511 aa5.44□□□□□ -1.54
CDKN3-201ENST00000216414 WIPI1Q5MNZ9 446 aaPredicted RBP5.44□□□□□ -1.54
CDKN3-201ENST00000216414 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
CDKN3-201ENST00000216414 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.44□□□□□ -1.54
CDKN3-201ENST00000216414 THAP5Q7Z6K1 395 aa5.44□□□□□ -1.54
CDKN3-201ENST00000216414 FBF1Q8TES7 1133 aa5.44□□□□□ -1.54
CDKN3-201ENST00000216414 RELTQ969Z4 430 aa5.44□□□□□ -1.54
CDKN3-201ENST00000216414 JAG2Q9Y219 1238 aa5.44□□□□□ -1.54
CDKN3-201ENST00000216414 ADAMTS20P59510 1910 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 DNAJC25-GNG10A0A024R161 153 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 CYP7A1P22680 504 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 CAP2P40123 477 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 CDK8P49336 464 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 HK2P52789 917 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 TNK2Q07912 1038 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 RALGPS1Q5JS13 557 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 PRAMEF13Q5VWM6 474 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 ATG14Q6ZNE5 492 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 C14orf37Q86TY3 774 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 HID1Q8IV36 788 aa5.43□□□□□ -1.54
CDKN3-201ENST00000216414 GIPC1O14908 333 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 USP17L7P0C7H9 530 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 GRK4P32298 578 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 KIR3DL1P43629 444 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 ERVFC1P60507 584 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 ALG1LQ6GMV1 187 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 DBX2Q6ZNG2 339 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 CDH24Q86UP0 819 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 MYLIPQ8WY64 445 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 GAL3ST3Q96A11 431 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 C12orf49Q9H741 205 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 TMEM59LQ9UK28 342 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 WWC3Q9ULE0 1092 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 TTF2Q9UNY4 1162 aaKnown RBP5.42□□□□□ -1.54
CDKN3-201ENST00000216414 SPG7Q9UQ90 795 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 SNCAIPQ9Y6H5 919 aa5.42□□□□□ -1.54
CDKN3-201ENST00000216414 ETV2O00321 342 aaPredicted RBP5.41□□□□□ -1.54
CDKN3-201ENST00000216414 CST3P01034 146 aaPredicted RBP5.41□□□□□ -1.54
CDKN3-201ENST00000216414 LMNB1P20700 586 aa5.41□□□□□ -1.54
CDKN3-201ENST00000216414 ATP2B2Q01814 1243 aa5.41□□□□□ -1.54
CDKN3-201ENST00000216414 TTBK2Q6IQ55 1244 aa5.41□□□□□ -1.54
CDKN3-201ENST00000216414 CREG2Q8IUH2 290 aa5.41□□□□□ -1.54
CDKN3-201ENST00000216414 ANKRD24Q8TF21 1146 aa5.41□□□□□ -1.54
CDKN3-201ENST00000216414 KCNN1Q92952 543 aa5.41□□□□□ -1.54
CDKN3-201ENST00000216414 COX4I2Q96KJ9 171 aa5.41□□□□□ -1.54
CDKN3-201ENST00000216414 DPH2Q9BQC3 489 aaPredicted RBP5.41□□□□□ -1.54
CDKN3-201ENST00000216414 CD320Q9NPF0 282 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms