RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CALCRLQ16602 461 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 SND1Q7KZF4 910 aaKnown RBP eCLIP15.16■□□□□ 0.026e-8■■■■□ 21.9
TGFBR3-201ENST00000212355 TPH2Q8IWU9 490 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 NRBP1Q9UHY1 535 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 MTUS1Q9ULD2 1270 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 ATXN8OSP0DMR3 200 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 SETDB1Q15047 1291 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 TRAPPC3LQ5T215 181 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 CASC4Q6P4E1 433 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 CABP7Q86V35 215 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 CYP2J2P51589 502 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 TAF12Q16514 161 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 FAM98CQ17RN3 349 aaKnown RBP15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 INF2Q27J81 1249 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 GKAP1Q5VSY0 366 aaPredicted RBP15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 CNBD1Q8NA66 436 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 PLBD2Q8NHP8 589 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 TRIM6Q9C030 488 aaPredicted RBP15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 DDX21Q9NR30 783 aaKnown RBP eCLIP15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 DENND2AQ9ULE3 1009 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 CRCPO75575 148 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 CNNM4Q6P4Q7 775 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 CCDC26Q8TAB7 109 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 RBM17Q96I25 401 aaKnown RBP15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 LSM14BQ9BX40 385 aaKnown RBP15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 PFDN4Q9NQP4 134 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 TPCN1Q9ULQ1 816 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 PCDHB13Q9Y5F0 798 aa15.16■□□□□ 0.02
TGFBR3-201ENST00000212355 DAPK3O43293 454 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 C2CD5Q86YS7 1000 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 CLIC4Q9Y696 253 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 GBP6Q6ZN66 633 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 UGGT2Q9NYU1 1516 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 NKIRAS1Q9NYS0 192 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 BUB1BO60566 1050 aaPredicted RBP15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 TBC1D8O95759 1140 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 ANO3Q9BYT9 981 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 RASSF4Q9H2L5 321 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
TGFBR3-201ENST00000212355 CSPG5O95196 566 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 PNMA8AQ86V59 439 aaPredicted RBP15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 PCDH11XQ9BZA7 1347 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 PCDH11YQ9BZA8 1340 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 ARHGEF35A5YM69 484 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 LRWD1Q9UFC0 647 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 FRMD3A2A2Y4 597 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 MAN1A1P33908 653 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 ERCC6LQ2NKX8 1250 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 LRRC47Q8N1G4 583 aaKnown RBP15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 IP6K1Q92551 441 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 APPBP2Q92624 585 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 GOLGA6BA6NDN3 693 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 CALUO43852 315 aaPredicted RBP15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 ZMYND10O75800 440 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 GYG1P46976 350 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 SCNN1DP51172 638 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 ADCY1Q08828 1119 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 NAA35Q5VZE5 725 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 NOX5Q96PH1 765 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 PLCD1P51178 756 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 TFAP4Q01664 338 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 NCBP1Q09161 790 aaKnown RBP15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 RILPL1Q5EBL4 403 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 DNAJC10Q8IXB1 793 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 STMN2Q93045 179 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 TTC14Q96N46 770 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 ANAPC4Q9UJX5 808 aa15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
TGFBR3-201ENST00000212355 TRPC3Q13507 836 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 HAUS7Q99871 368 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 FAM204AQ9H8W3 233 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 TRPM2O94759 1503 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 TXNDC9O14530 226 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 PFKFB1P16118 471 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 LRRC24Q50LG9 513 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 ZMYM4Q5VZL5 1548 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 RPL13P26373 211 aaKnown RBP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 ADD1P35611 737 aaKnown RBP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 CCDC105Q8IYK2 499 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 SMYD4Q8IYR2 804 aaPredicted RBP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 EPSTI1Q96J88 318 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 FTOQ9C0B1 505 aaKnown RBP eCLIP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 PER1O15534 1290 aaPredicted RBP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 SEC31AO94979 1220 aaKnown RBP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 PCK1P35558 622 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 BCAMP50895 628 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 GABPAQ06546 454 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 IFRD2Q12894 506 aaPredicted RBP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 U2AF1L4Q8WU68 220 aaKnown RBP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 JDP2Q8WYK2 163 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 ANKRD2Q9GZV1 360 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 TLR7Q9NYK1 1049 aaKnown RBP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 UHRF1BP1LA0JNW5 1464 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 HMGXB3Q12766 1538 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 STX10O60499 249 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 CUTAO60888 179 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 ATP2A2P16615 1042 aaKnown RBP15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 MYRIPQ8NFW9 859 aa15.13■□□□□ 0.01
TGFBR3-201ENST00000212355 CCDC110Q8TBZ0 833 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms