RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 YDJCA8MPS7 323 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 POLD1P28340 1107 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 TGFB2P61812 414 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 UBE2HP62256 183 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 HDLBPQ00341 1268 aaKnown RBP18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 GUCY1B3Q02153 619 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 RCSD1Q6JBY9 416 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 APOBEC3HQ6NTF7 200 aaKnown RBP18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 CATIPQ7Z7H3 387 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 TTC6Q86TZ1 520 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 SLC44A5Q8NCS7 719 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 NUP133Q8WUM0 1156 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 ZDHHC15Q96MV8 337 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 ZNF287Q9HBT7 754 aa18.18■□□□□ 0.5
LAPTM4A-201ENST00000175091 RASA1P20936 1047 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 NBPF11Q86T75 865 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 KIAA0825Q8IV33 1275 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 ALG1Q9BT22 464 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 SCAND2PQ9GZW5 306 aaPredicted RBP18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 DDX4Q9NQI0 724 aaKnown RBP18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 GREB1LQ9C091 1923 aaPredicted RBP18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 CALM1P0DP23 149 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 CALM2P0DP24 149 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 CALM3P0DP25 149 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 TFAP4Q01664 338 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 CDC42EP5Q6NZY7 148 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 AIFM3Q96NN9 605 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 MKNK2Q9HBH9 465 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 TCP11L1Q9NUJ3 509 aa18.17■□□□□ 0.5
LAPTM4A-201ENST00000175091 CDK8P49336 464 aa18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 SSRP1Q08945 709 aaKnown RBP18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 PICALMQ13492 652 aa18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 SOGA3Q5TF21 947 aa18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 OTUD7BQ6GQQ9 843 aa18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 SLC26A6Q9BXS9 759 aa18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 IL17RBQ9NRM6 502 aa18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 USP40Q9NVE5 1235 aa18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 RBM28Q9NW13 759 aaKnown RBP18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 TMEM63CQ9P1W3 806 aa18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 PLIN4Q96Q06 1357 aa18.16■□□□□ 0.5
LAPTM4A-201ENST00000175091 FSD2A1L4K1 749 aa18.15■□□□□ 0.5
LAPTM4A-201ENST00000175091 DGKHQ86XP1 1220 aa18.15■□□□□ 0.5
LAPTM4A-201ENST00000175091 TRIM22Q8IYM9 498 aa18.15■□□□□ 0.5
LAPTM4A-201ENST00000175091 CRACR2BQ8N4Y2 399 aaPredicted RBP18.15■□□□□ 0.5
LAPTM4A-201ENST00000175091 ANKS1AQ92625 1134 aa18.15■□□□□ 0.5
LAPTM4A-201ENST00000175091 GJB4Q9NTQ9 266 aa18.15■□□□□ 0.5
LAPTM4A-201ENST00000175091 RBM27Q9P2N5 1060 aaKnown RBP18.15■□□□□ 0.5
LAPTM4A-201ENST00000175091 SERPINA10Q9UK55 444 aa18.15■□□□□ 0.5
LAPTM4A-201ENST00000175091 TSPY3P0CV98 308 aa18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 TSPY8P0CW00 308 aa18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 GABPAQ06546 454 aa18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 ZSCAN23Q3MJ62 389 aa18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 CCDC178Q5BJE1 867 aa18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 LEO1Q8WVC0 666 aaPredicted RBP18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 WASF1Q92558 559 aa18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 SGIP1Q9BQI5 828 aa18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 RNF26Q9BY78 433 aaPredicted RBP18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 OSBPL5Q9H0X9 879 aaPredicted RBP18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 VPS33BQ9H267 617 aa18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 PIM2Q9P1W9 311 aa18.14■□□□□ 0.5
LAPTM4A-201ENST00000175091 UBE2Q2LH0YL09 131 aa18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 DEXIO95424 95 aa18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 FUT2Q10981 343 aa18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 KRT40Q6A162 431 aa18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 ATL3Q6DD88 541 aa18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 BRAPQ7Z569 592 aa18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 SPATA32Q96LK8 384 aa18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 CFAP45Q9UL16 551 aa18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 ISY1Q9ULR0 285 aaKnown RBP18.14■□□□□ 0.49
LAPTM4A-201ENST00000175091 MYO3BQ8WXR4 1341 aa18.13■□□□□ 0.49
LAPTM4A-201ENST00000175091 ZNF445P59923 1031 aa18.13■□□□□ 0.49
LAPTM4A-201ENST00000175091 TMTC3Q6ZXV5 915 aa18.13■□□□□ 0.49
LAPTM4A-201ENST00000175091 TFIP11Q9UBB9 837 aaKnown RBP18.13■□□□□ 0.49
LAPTM4A-201ENST00000175091 KIF28PB7ZC32 967 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 GUCY1A2P33402 732 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 NFIAQ12857 509 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 CMTR1Q8N1G2 835 aaKnown RBP18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 LARGE2Q8N3Y3 721 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 PCDHAC2Q9Y5I4 1007 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 ARFGEF1Q9Y6D6 1849 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 CNTNAP5Q8WYK1 1306 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 PLEKHA8P1O95397 391 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 NEDD1Q8NHV4 660 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 CTCFLQ8NI51 663 aaPredicted RBP18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 ZNF396Q96N95 335 aaPredicted RBP18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 USP28Q96RU2 1077 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 IDI2Q9BXS1 227 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 KAT14Q9H8E8 782 aa18.12■□□□□ 0.49
LAPTM4A-201ENST00000175091 TRIM29Q14134 588 aa18.11■□□□□ 0.49
LAPTM4A-201ENST00000175091 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
LAPTM4A-201ENST00000175091 PNMA1Q8ND90 353 aa18.11■□□□□ 0.49
LAPTM4A-201ENST00000175091 UPF1Q92900 1129 aaKnown RBP eCLIP18.11■□□□□ 0.496e-16■□□□□ 9.2
LAPTM4A-201ENST00000175091 SYAP1Q96A49 352 aaPredicted RBP18.11■□□□□ 0.49
LAPTM4A-201ENST00000175091 MAP3K14Q99558 947 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms